Gene A2cp1_0252 details

Gene Information

• Locus tag: A2cp1_0252
• ID: 7298954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 272900
• End bp: 273508
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 643593047
• Product: RNA polymerase sigma factor
• Protein accession: YP_002490677
• Protein GI: 220915373
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.105605
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGGACG AGAGCGACGA GCGGCTGATG CTCCGGTTCC GGGACGGCGA CGCCCGGGCG 
TTCGAGGCCC TCGTGCGCCG CCACCGGACG CCGATCTTCT CCTTCCTGCT CCGCCTGACC 
CGCGATCGCG GCCGGGCGGA GGACCTCTGC CAGGACACGT TCCTGCGGGT GGTGAAGGCT 
TCCGGCGCCT GGGAGCCGCG CGCCCGCTTC CGCACCTGGC TCTACGCGAT GGCCCGCAAC 
CTGGCGGTGG ACGAGTCGCG GCGCATGGCG TTCCGCCGCG CCAGCTCGCT CGAGGCGGAC 
CCCGCCGCCT CCGCCCTGGC CGCGGACGAT CCGGCGCCCG ACCGCGCGGC CGACGCGGCG 
CTCGTCCGCC CGCTCCTCGA GGCGGCGCTC GCGTCGCTGC CCGAGGAGCA GCGCGAGGTG 
TTCCTGCTGC GCGAGCACGC GGGGCTCAGG TTCCCGGAGA TCGCCGAGGT CACCGGCGCG 
CCGGAGCCGA CCGTGAAGAG CCGGATGCGC TACGCGCTCG AGGCGCTGCG CGAGCGGCTC 
GCGGCGATGG GCGTGGAGCC GGAGGTGGCC GCGGGCGGCC CCGCCTCGAC CCGGAGCGCG 
GCACCATGA 

 

Protein sequence

MPDESDERLM LRFRDGDARA FEALVRRHRT PIFSFLLRLT RDRGRAEDLC QDTFLRVVKA 
SGAWEPRARF RTWLYAMARN LAVDESRRMA FRRASSLEAD PAASALAADD PAPDRAADAA 
LVRPLLEAAL ASLPEEQREV FLLREHAGLR FPEIAEVTGA PEPTVKSRMR YALEALRERL 
AAMGVEPEVA AGGPASTRSA AP