Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0209 |
Symbol | |
ID | 7298444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 228965 |
End bp | 229453 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 643593004 |
Product | Shikimate kinase |
Protein accession | YP_002490634 |
Protein GI | 220915330 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCTCG GATCCGCTGA GACGCTGGCG CTCACCGGGA TGATGGGCTC GGGGAAGTCC ACCGTGGCCC CGCTGCTGGC GCGCTGGCTG GGCCGGCGGC TGGTGCGGCT CGACGACGAG ATCGTGCGCG CGGCGGGCAA GCCCATCGCC CGGGTGTTCG CCGAGGACGG CGAGGGGCGC TTCCGCGCGC TGGAGCGCGC CGCGGTGGCC GCGCTGCCGC CGGGCGCGGT GGCGGACCTG GGCGGCGGCG CGTTCTGCGA CCCGCACGGC GCCGCGCGCC TGCTCGCCAC CGCGCGGGTG GTGTTCCTCG ACGTCTCGGC GCAGGAGGCC GCCCGCCGCA TCGGCGAGGA TCCGGCCCGC CCGCTCGCGG CGCGCTGGGA GGCGCTCCGC GCGCGCCGGC TGCCGCTCTA CCGGCGCGCC CACCTCACCG TCCACGTGGA CGGGATGACG CCCGAGGCGG TGGCCCGGCG CGTCCTGGAG TCGCTATGA
|
Protein sequence | MPLGSAETLA LTGMMGSGKS TVAPLLARWL GRRLVRLDDE IVRAAGKPIA RVFAEDGEGR FRALERAAVA ALPPGAVADL GGGAFCDPHG AARLLATARV VFLDVSAQEA ARRIGEDPAR PLAARWEALR ARRLPLYRRA HLTVHVDGMT PEAVARRVLE SL
|
| |