| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0048 |
|---|
| Symbol | |
|---|
| ID | 7296690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 52777 |
|---|
| End bp | 55725 |
|---|
| Gene Length | 2949 bp |
|---|
| Protein Length | 982 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643592844 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002490474 |
|---|
| Protein GI | 220915170 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTC GCCGCTACGG TCCCCCGCTG GCCCTCGCCT TCGCGTCGCT GCTCGCCTGC
ACCGACGTGA AGCAGGAGAA GCCCGCCCCG CAGCTCGTGA TCGCCACCTT CGCGTCGCCG
AACATCCCGA CGCCCAACGA CCTGGTCCTG CAGGCCGTCC CGACGCTCCC CGACAGCGCG
CAGAAGGAGC TGCTCCAGTC CTTCATCGAC GCGGGCGGGT TCCCGAGCGA TCAGGAGGTC
GCCATCACCA TCCCGTTCCG GGCGGTCAGC TGGAACGGCA GCGCCTATGT CGAGACGACG
CCGCCGGACC TCGATCCCGC CACGGTGACG ACGTCCACGG TGGCGCTGCT CAAGGTGGAC
GGCGCCCCGC AGGCGGTCGA GTTCGAGGTG GGCAGCGCCA CCGCGGGTCG CCTCGTGCTC
CGGAAGAAGG CGGACGCGAG CGGCAGCCGC CGCTTCGCGC CCGGGCGCTA CGTCGTCGCG
GTGCGCGGCG GCGCCTCCGG CGTGAAGACC ACCGCCGCCC AGGGCGCGAT GCCGGTGAAC
CCCGACCAGG CGATCGCGAT CGCGGCGCAG AACAAGGACC TCACCGTCCA CGAGAACCAG
CCGCCCGGGC TGACCCCGGC GCTGGTGGCC CAGCTCGAGG CGGTGCGCAA GGCGCTGTGG
AGCCCGCTCA CCTGGACCGA CGTCGGCGGT CGCTGGACCG CCTCCGTGGA CACGAACGTC
GCCCCGGCCT TCGCGGCGGT GGCGCCGACG TTCGCGCCCG CCGAGGTCGC GGCCATCGCC
ACCTTCGGCA TCGCGCCGGC CGCGGCCCAG CCGCTGACCG ACTCCGGCTC CGGCCAGATC
CCGCTGCCCT CGACGTTCCT GCTCGACGGC ACCCGGCCGG CCAACGACCC GCCCACCCGC
TTCTACGTCC GCAACGTCCC CGCGTTCGGC CCGGCCGCCG CCGGCCTCGC CACGCTGGAC
GGCTTCTCCA CCACCGGCAT GATGCTCGCG CCGCTCAGCG CGCCGGTCGC CGCCTCCACC
GTGAACGCGC AGACGGTGCT CCTGTTCGAG CTCCCGGAAG GTGCCGGCGC CCCGCGCCGC
ATGCGCGACG TCGCCGCCGC GCTCGGCGCC GGCCAGCCCG CCACCGCCGA GTACCTCACC
CAGCCGCCGG CGCTGAACCG CACCGTGCAG GTGGGCGGCG CCGACGTGGC CGTGACCACG
GCCATCGGGC TGCAGCCCGG CGTGGCCGTG CCGGTGCCGG GCGTCGGGAT CGTGCCGACG
CCGCCGCTCA AGGAGAAGCG CAACTACGCG GTGGTCATCA CCGACGGCGT GAAGGACCTC
GCCGGCAACC CGCTGAAGCG CTCCACGCTC GGCAACATCC TGTTCACCTT CACGAACCCG
CCGGCGGTGG ACGGCGTCTC GCAGCTCGCC GGCGTGTCCA ACGCCGACGC GACCGCGCTC
GCCACCCTGC GGGCCGGGCT CGAGCCGCTC CTCGCCAACC TGGGCGCGCT CACCGGCGGC
GCGGTCACCC GGGACAACGT GGTGATGGCG TACACGGTCC AGACGCAGAC CGTGACCGAC
GTCTCGGTGG GCCTCTCGGC GCTGCCGTAC CAGACCCCGA CCGCGTTCGT GGGCCAGGGC
GTCGCCCCGC TCGACCTCGC CGCGCTCGGC TTCGACGCGG CCGCGCAGGC GGCGCTGTTC
CCGAACGTCG GCGGCTTCCT CACCGCCATG GTGCCGACCG TCGACGCCAT CAACCCGGCC
AACGGCGCGC TCAACCCCGA CACCACCCAG TGGGCGCCGA AGCCGATCCC GGCGGTGGTG
GCCTACCCGG CCGACGCCGC CTGCACCACC GCCACCCCGT GCGCGCGCCC GCTGGTGGTC
TTCCACCACG GCCTGTCCGG CGGCCGGCTC CAGATGCTCA CCGTCGCGAA CTCGCTCGCG
GCGAAGGGCT TCGTGGTCGC CGCGATCGAC GCGCCGTACC ACGGCGACCG CGCGTTCTGC
ATGGAGAACT CGGAGTGCAC CACCGACGGC ACCGCCGACG GCGTGTGCAC GCCGGACCAG
GCCAAGGCCG GCCAGGGCGA CGCCATCCCG CCGGGCACCT GCACCACCGG CCACCTGCGC
GGCACGAACC TCTCCACCGT GGCGTCCGGG AACTACTTCA TCTCGGGCAA CTTCTTCCGC
ATCCGCGACG CCATCCGCCA GGACCACATC GACCAGGCCG CGCTGGTGCT GGCGGTGGCG
CGCCCGCCCG CCCCGTTCCC GCAGCCGGCG CAGGATCCGC TGGCGGCGGC GCTCTTCCAG
CGCGGGTTCG TGGTGAACCC GACGGCGGTC CACTACGAGG GCATCTCCCT CGGCGGCATC
ATCGGGACCG AGCTGCTCGC CACCAACCCG CGCTTCGCGC GCGGCGTGCT GAACGTTCCG
GGCGGGACGC TGGTGGACGT GTTCACGAAC GCGCCCGCGT TCGCGACCTC GGTGAACGAG
CTGTTCCTCT CGCTCGGCAT CGACCGGTCG CAGATCCCCA CCAACCCGGC GGTCGCGTCG
CGCTACCTGC AGACGCTCAT CCTGGCGAAG TGGATCCTGG ATCCGGCGGA GCCGCTCAAC
TACGCCGCGC ACGTCCGCAC CAAGCTCGCG AGCCCGCTGC TCGCCGCCCC GCCCGCGGGG
ATGGGCGGCA CCGGCCTCGT CCACGCGGCC ACCGACGTCC TCGGCCAGCT CGCGAAGTGC
GACGCGGTGG TCCCGAACGC CACCACGGTG GTGGGGGGCA TCCCGCTGCC CTACGGCGAC
GAGCTGCTGG CGCTCGCCGG CGCACCGAGC ACGCTGTACG TCTCGGCCTC CGCCGCGAAC
AACTGCGTCC CGCACGGCGT GCTGAACGAC ACGCTGCTCC CGACCCCCAT CGGCGGCCAG
GTTCGCGACG ACGCCGCGCA GTTCCTCCTC GACCTGACCG TGCCGGCCTC GCCGGCGACC
CTGCCGTAA
|
|---|
| Protein sequence | MSLRRYGPPL ALAFASLLAC TDVKQEKPAP QLVIATFASP NIPTPNDLVL QAVPTLPDSA
QKELLQSFID AGGFPSDQEV AITIPFRAVS WNGSAYVETT PPDLDPATVT TSTVALLKVD
GAPQAVEFEV GSATAGRLVL RKKADASGSR RFAPGRYVVA VRGGASGVKT TAAQGAMPVN
PDQAIAIAAQ NKDLTVHENQ PPGLTPALVA QLEAVRKALW SPLTWTDVGG RWTASVDTNV
APAFAAVAPT FAPAEVAAIA TFGIAPAAAQ PLTDSGSGQI PLPSTFLLDG TRPANDPPTR
FYVRNVPAFG PAAAGLATLD GFSTTGMMLA PLSAPVAAST VNAQTVLLFE LPEGAGAPRR
MRDVAAALGA GQPATAEYLT QPPALNRTVQ VGGADVAVTT AIGLQPGVAV PVPGVGIVPT
PPLKEKRNYA VVITDGVKDL AGNPLKRSTL GNILFTFTNP PAVDGVSQLA GVSNADATAL
ATLRAGLEPL LANLGALTGG AVTRDNVVMA YTVQTQTVTD VSVGLSALPY QTPTAFVGQG
VAPLDLAALG FDAAAQAALF PNVGGFLTAM VPTVDAINPA NGALNPDTTQ WAPKPIPAVV
AYPADAACTT ATPCARPLVV FHHGLSGGRL QMLTVANSLA AKGFVVAAID APYHGDRAFC
MENSECTTDG TADGVCTPDQ AKAGQGDAIP PGTCTTGHLR GTNLSTVASG NYFISGNFFR
IRDAIRQDHI DQAALVLAVA RPPAPFPQPA QDPLAAALFQ RGFVVNPTAV HYEGISLGGI
IGTELLATNP RFARGVLNVP GGTLVDVFTN APAFATSVNE LFLSLGIDRS QIPTNPAVAS
RYLQTLILAK WILDPAEPLN YAAHVRTKLA SPLLAAPPAG MGGTGLVHAA TDVLGQLAKC
DAVVPNATTV VGGIPLPYGD ELLALAGAPS TLYVSASAAN NCVPHGVLND TLLPTPIGGQ
VRDDAAQFLL DLTVPASPAT LP
|
|---|
| |