| Apar_0197 |
CDS |
NC_013203 |
233616 |
236993 |
- |
3378 |
type III restriction protein res subunit |
YP_003179221 |
normal |
1 |
decreased coverage |
0.000621753 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0198 |
CDS |
NC_013203 |
237003 |
238163 |
- |
1161 |
restriction modification system DNA specificity domain protein |
YP_003179222 |
normal |
0.719886 |
decreased coverage |
0.000218103 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0199 |
CDS |
NC_013203 |
238156 |
239676 |
- |
1521 |
N-6 DNA methylase |
YP_003179223 |
normal |
0.471881 |
decreased coverage |
0.000223426 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0283 |
CDS |
NC_013203 |
324104 |
324856 |
+ |
753 |
short-chain dehydrogenase/reductase SDR |
YP_003179305 |
decreased coverage |
0.000000106623 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0284 |
CDS |
NC_013203 |
324867 |
325862 |
+ |
996 |
2-keto-3-deoxygluconate permease |
YP_003179306 |
decreased coverage |
0.000000189316 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0290 |
CDS |
NC_013203 |
334856 |
336751 |
+ |
1896 |
heavy metal translocating P-type ATPase |
YP_003179312 |
decreased coverage |
0.00000372175 |
normal |
0.539461 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0322 |
CDS |
NC_013203 |
369447 |
370364 |
+ |
918 |
1-phosphofructokinase |
YP_003179344 |
decreased coverage |
0.000799963 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0402 |
CDS |
NC_013203 |
464120 |
464887 |
- |
768 |
FeS assembly ATPase SufC |
YP_003179424 |
decreased coverage |
0.00000798388 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0403 |
CDS |
NC_013203 |
465219 |
466529 |
+ |
1311 |
histidyl-tRNA synthetase |
YP_003179425 |
decreased coverage |
0.000000768069 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0464 |
CDS |
NC_013203 |
533833 |
534831 |
+ |
999 |
Protein-N(pi)-phosphohistidine--sugar phosphotransferase |
YP_003179486 |
decreased coverage |
0.00000027828 |
normal |
0.826743 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0489 |
CDS |
NC_013203 |
559732 |
560868 |
+ |
1137 |
cell division protein FtsZ |
YP_003179511 |
decreased coverage |
0.00000039115 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0522 |
CDS |
NC_013203 |
604917 |
605498 |
+ |
582 |
translation initiation factor IF-3 |
YP_003179544 |
decreased coverage |
0.0000000692532 |
hitchhiker |
0.000000579185 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0523 |
CDS |
NC_013203 |
605500 |
605700 |
+ |
201 |
ribosomal protein L35 |
YP_003179545 |
decreased coverage |
0.0000000250837 |
unclonable |
0.0000000265454 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0524 |
CDS |
NC_013203 |
605742 |
606101 |
+ |
360 |
ribosomal protein L20 |
YP_003179546 |
decreased coverage |
0.0000000408752 |
unclonable |
0.0000000274126 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0593 |
CDS |
NC_013203 |
662291 |
662620 |
+ |
330 |
hypothetical protein |
YP_003179614 |
decreased coverage |
0.00835781 |
normal |
0.439807 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0679 |
CDS |
NC_013203 |
758042 |
758296 |
+ |
255 |
ribosomal protein L27 |
YP_003179699 |
decreased coverage |
0.00000246581 |
normal |
0.202248 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0749 |
CDS |
NC_013203 |
832077 |
832808 |
+ |
732 |
CDP-alcohol phosphatidyltransferase |
YP_003179769 |
decreased coverage |
0.0000000801084 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0889 |
CDS |
NC_013203 |
994325 |
994987 |
+ |
663 |
HAD-superfamily hydrolase, subfamily IA, variant 3 |
YP_003179909 |
decreased coverage |
0.00000345367 |
normal |
0.0902559 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0896 |
CDS |
NC_013203 |
1000657 |
1002444 |
- |
1788 |
amidohydrolase-like protein |
YP_003179916 |
decreased coverage |
0.000474495 |
normal |
0.217334 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0953 |
CDS |
NC_013203 |
1072779 |
1074029 |
- |
1251 |
peptidase T |
YP_003179973 |
decreased coverage |
0.00000027828 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0954 |
CDS |
NC_013203 |
1074092 |
1074886 |
- |
795 |
peptidase C26 |
YP_003179974 |
decreased coverage |
0.000028221 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_0974 |
CDS |
NC_013203 |
1099151 |
1102018 |
- |
2868 |
Phosphoenolpyruvate carboxylase |
YP_003179994 |
decreased coverage |
0.0000578394 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1139 |
CDS |
NC_013203 |
1286694 |
1287482 |
- |
789 |
methionine aminopeptidase, type I |
YP_003180158 |
decreased coverage |
0.000000863177 |
normal |
0.0264901 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1140 |
CDS |
NC_013203 |
1287479 |
1288105 |
- |
627 |
adenylate kinase |
YP_003180159 |
decreased coverage |
0.000000592914 |
normal |
0.025222 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1141 |
CDS |
NC_013203 |
1288173 |
1289453 |
- |
1281 |
preprotein translocase, SecY subunit |
YP_003180160 |
decreased coverage |
0.00000440606 |
normal |
0.0147779 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1142 |
CDS |
NC_013203 |
1289453 |
1289899 |
- |
447 |
ribosomal protein L15 |
YP_003180161 |
decreased coverage |
0.000000449259 |
normal |
0.0114538 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1143 |
CDS |
NC_013203 |
1289911 |
1290096 |
- |
186 |
ribosomal protein L30 |
YP_003180162 |
decreased coverage |
0.00000025708 |
normal |
0.0109898 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1144 |
CDS |
NC_013203 |
1290099 |
1290620 |
- |
522 |
ribosomal protein S5 |
YP_003180163 |
decreased coverage |
0.000000788101 |
normal |
0.0120151 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1145 |
CDS |
NC_013203 |
1290630 |
1290998 |
- |
369 |
ribosomal protein L18 |
YP_003180164 |
decreased coverage |
0.000000549459 |
normal |
0.0107289 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1146 |
CDS |
NC_013203 |
1291067 |
1291603 |
- |
537 |
ribosomal protein L6 |
YP_003180165 |
decreased coverage |
0.00000104709 |
hitchhiker |
0.00466337 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1147 |
CDS |
NC_013203 |
1291631 |
1292029 |
- |
399 |
ribosomal protein S8 |
YP_003180166 |
decreased coverage |
0.000000686706 |
hitchhiker |
0.00453997 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1188 |
CDS |
NC_013203 |
1332145 |
1332624 |
- |
480 |
transcription elongation factor GreA |
YP_003180207 |
decreased coverage |
0.00439545 |
normal |
0.0602948 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1218 |
CDS |
NC_013203 |
1363950 |
1365503 |
+ |
1554 |
UDP-N-acetylmuramyl-tripeptide synthetase |
YP_003180236 |
decreased coverage |
0.000328794 |
normal |
0.498702 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1232 |
CDS |
NC_013203 |
1383977 |
1385338 |
+ |
1362 |
beta-lactamase domain protein |
YP_003180249 |
decreased coverage |
0.00000615653 |
normal |
1 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1304 |
CDS |
NC_013203 |
1470588 |
1471388 |
- |
801 |
ATP synthase F0, A subunit |
YP_003180319 |
decreased coverage |
0.000065102 |
normal |
0.293813 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1326 |
CDS |
NC_013203 |
1489348 |
1490094 |
- |
747 |
CobB/CobQ domain protein glutamine amidotransferase |
YP_003180341 |
decreased coverage |
0.00000536393 |
hitchhiker |
0.000591695 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1327 |
CDS |
NC_013203 |
1490087 |
1491499 |
- |
1413 |
Mur ligase middle domain protein |
YP_003180342 |
decreased coverage |
0.00000399076 |
decreased coverage |
0.000242236 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1328 |
CDS |
NC_013203 |
1491648 |
1495202 |
- |
3555 |
pyruvate ferredoxin/flavodoxin oxidoreductase |
YP_003180343 |
normal |
1 |
decreased coverage |
0.000692132 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1329 |
CDS |
NC_013203 |
1495596 |
1496258 |
- |
663 |
hypothetical protein |
YP_003180344 |
normal |
0.450566 |
decreased coverage |
0.000223426 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1330 |
CDS |
NC_013203 |
1496311 |
1497900 |
- |
1590 |
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
YP_003180345 |
hitchhiker |
0.00539756 |
decreased coverage |
0.000346935 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1331 |
CDS |
NC_013203 |
1498041 |
1498670 |
+ |
630 |
GCN5-related N-acetyltransferase |
YP_003180346 |
unclonable |
0.00000000599156 |
decreased coverage |
0.000238136 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1332 |
CDS |
NC_013203 |
1498673 |
1499608 |
+ |
936 |
Glutamate--tRNA ligase |
YP_003180347 |
hitchhiker |
0.000000257577 |
decreased coverage |
0.00027046 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1333 |
CDS |
NC_013203 |
1499605 |
1500285 |
+ |
681 |
histidine kinase |
YP_003180348 |
hitchhiker |
0.000137869 |
decreased coverage |
0.000238136 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_1334 |
CDS |
NC_013203 |
1500260 |
1500979 |
- |
720 |
transcriptional regulator, GntR family |
YP_003180349 |
hitchhiker |
0.00015702 |
decreased coverage |
0.000248139 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |
| Apar_R0030 |
tRNA |
NC_013203 |
1018306 |
1018381 |
- |
76 |
tRNA-Val |
|
decreased coverage |
0.00000000857099 |
normal |
0.523891 |
Atopobium parvulum DSM 20469 |
Bacteria |
|
|
- |