59 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
BbuZS7_0074  CDS  NC_011728  69517  70077  +  561  hypothetical protein  YP_002374603  decreased coverage  0.000683844  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0076  CDS  NC_011728  71152  72561  +  1410  hypothetical protein  YP_002374605  decreased coverage  0.00615233  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0080  CDS  NC_011728  75724  76404  +  681  ABC transporter, ATP-binding protein  YP_002374609  decreased coverage  0.0066194  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0219  CDS  NC_011728  218422  219000  -  579  translation elongation factor P  YP_002374739  decreased coverage  0.00000139055  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0220  CDS  NC_011728  219166  220005  +  840  phosphate ABC transporter, periplasmic phosphate-binding protein  YP_002374740  decreased coverage  0.00000480634  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0238  CDS  NC_011728  237335  237592  -  258  30S ribosomal protein S20  YP_002374756  decreased coverage  0.00017388  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0265  CDS  NC_011728  269853  272006  -  2154  transglycosylase SLT domain protein  YP_002374782  decreased coverage  0.00304053  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0266  CDS  NC_011728  271999  273015  -  1017  hypothetical protein  YP_002374783  decreased coverage  0.0000816712  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0315  CDS  NC_011728  316615  317373  -  759  hypothetical protein  YP_002374832  decreased coverage  0.000116938  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0321  CDS  NC_011728  321408  322214  -  807  amino acid or sugar ABC transport systems, permease protein  YP_002374838  decreased coverage  0.000115893  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0322  CDS  NC_011728  322215  323147  -  933  hypothetical protein  YP_002374839  decreased coverage  0.00232188  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0324  CDS  NC_011728  324604  325656  -  1053  exported protein  YP_002374841  decreased coverage  0.0000722005  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0341  CDS  NC_011728  344399  345700  +  1302  phosphopyruvate hydratase  YP_002374857  decreased coverage  0.00111686  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0342  CDS  NC_011728  345767  346177  -  411  30S ribosomal protein S9  YP_002374858  decreased coverage  0.00140539  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0348  CDS  NC_011728  350677  352773  -  2097  DNA helicase  YP_002374864  decreased coverage  0.00900686  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0349  CDS  NC_011728  352776  353972  -  1197  hypothetical protein  YP_002374865  decreased coverage  0.00827642  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0352  CDS  NC_011728  356343  357776  +  1434  pyruvate kinase  YP_002374868  decreased coverage  0.0043554  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0353  CDS  NC_011728  357794  358534  +  741  hypothetical protein  YP_002374869  decreased coverage  0.00281199  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0356  CDS  NC_011728  360524  361657  +  1134  hypothetical protein  YP_002374872  decreased coverage  0.000068475  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0399  tRNA  NC_011728  407743  407818  -  76  tRNA-Thr    decreased coverage  0.00000357697  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0400  CDS  NC_011728  407892  408740  -  849  hypothetical protein  YP_002374913  decreased coverage  0.0000382173  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0401  CDS  NC_011728  408754  409785  -  1032  putative lipoprotein  YP_002374914  decreased coverage  0.00000741159  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0460  CDS  NC_011728  468664  469506  +  843  transporter, small conductance mechanosensitive ion channel (MscS) family protein  YP_002374965  decreased coverage  0.00313509  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0486  CDS  NC_011728  490245  490634  -  390  putative lipoprotein  YP_002374985  decreased coverage  0.000843941  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0537  CDS  NC_011728  535455  536264  -  810  hypothetical protein  YP_002375036  decreased coverage  0.00291593  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0538  CDS  NC_011728  536248  536862  -  615  hypothetical protein  YP_002375037  decreased coverage  0.00554774  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0541  CDS  NC_011728  539137  539904  +  768  exodeoxyribonuclease III  YP_002375040  decreased coverage  0.008532  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0624  tRNA  NC_011728  632268  632346  +  79  tRNA-Arg    decreased coverage  0.00406719  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0625  tRNA  NC_011728  632421  632506  +  86  tRNA-Leu    decreased coverage  0.00420103  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0626  tRNA  NC_011728  632508  632581  +  74  tRNA-Gly    decreased coverage  0.00428468  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0627    NC_011728  632714  633937  +  1224      decreased coverage  0.00985256  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0630  CDS  NC_011728  635855  638263  +  2409  ATP-dependent protease La  YP_002375118  decreased coverage  0.00470821  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0638  CDS  NC_011728  642670  644265  -  1596  putative beta-glucosidase  YP_002375123  decreased coverage  0.00229499  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0639  tRNA  NC_011728  644477  644553  +  77  tRNA-Met    decreased coverage  0.000292173  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0640  CDS  NC_011728  644564  645118  +  555  putative 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein  YP_002375124  decreased coverage  0.00127997  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0643  CDS  NC_011728  649898  650860  +  963  hypothetical protein  YP_002375127  decreased coverage  0.000581694  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0690  CDS  NC_011728  705276  706676  +  1401  purine-binding chemotaxis protein  YP_002375170  decreased coverage  0.00466397  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0792    NC_011728  801778  802926  -  1149      decreased coverage  0.000921141  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0793  CDS  NC_011728  802923  803969  -  1047  hypothetical protein  YP_002375263  decreased coverage  0.0073979  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0821  CDS  NC_011728  825230  826333  +  1104  thymidine kinase  YP_002375290  decreased coverage  0.00672514  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0837  CDS  NC_011728  848501  849790  +  1290  hypothetical protein  YP_002375305  decreased coverage  0.00840057  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0873    NC_011728  897844  898416  +  573      decreased coverage  0.00000203399  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0874    NC_011728  898428  899300  +  873      decreased coverage  0.0000529778  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0878    NC_011728  903937  904083  +  147      decreased coverage  0.00000823282  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_A13  CDS  NC_011784  9413  10234  +  822  outer surface protein A (OspA)  YP_002455341  decreased coverage  0.0000199869  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_A14  CDS  NC_011784  10244  11134  +  891  outer surface protein B (OspB)  YP_002455342  decreased coverage  0.000388009  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_AC60  CDS  NC_011720  40730  41362  +  633  BdrE  YP_002364692  decreased coverage  0.0000000000000600085  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_B28    NC_011724  24842  26470  +  1629      decreased coverage  0.0000640468  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_F18    NC_011780  13497  15263  -  1767      decreased coverage  0.000619285  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_F19    NC_011780  15349  16317  -  969      decreased coverage  0.00376308  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_F20  CDS  NC_011780  16625  17425  -  801  hypothetical protein  YP_002455270  decreased coverage  0.00339084  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_G10  CDS  NC_011779  7526  10789  -  3264  tape measure domain protein  YP_002455237  decreased coverage  0.00000554511  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_K13  CDS  NC_011778  10300  11946  +  1647  adenine deaminase  YP_002455212  decreased coverage  0.0000000297334  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_K18  CDS  NC_011778  16274  16885  +  612  putative plasmid partition protein  YP_002455217  decreased coverage  0.000000109764  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_N31  CDS  NC_011722  17250  17678  +  429  lipoprotein  YP_002364774  decreased coverage  0.00667873  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_P32  CDS  NC_011731  17912  18859  -  948  hypothetical protein  YP_002380620  decreased coverage  0.00000000903499  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_R29  CDS  NC_011736  17912  18859  -  948  erf family protein  YP_002380744  decreased coverage  0.0000000144842  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_R30  CDS  NC_011736  19248  20348  +  1101  hypothetical protein  YP_002380745  decreased coverage  0.0000133603  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_X29  CDS  NC_011735  17837  18853  -  1017  erf family protein  YP_002380705  decreased coverage  0.000034764  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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