| SeD_A0044 |
CDS |
NC_011205 |
48370 |
50409 |
- |
2040 |
glycoside hydrolase, family 31 |
YP_002213996 |
normal |
0.228548 |
decreased coverage |
0.00512205 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0098 |
CDS |
NC_011205 |
103679 |
103840 |
- |
162 |
hypothetical protein |
YP_002214046 |
decreased coverage |
0.0000599323 |
normal |
0.605992 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0141 |
CDS |
NC_011205 |
149913 |
151175 |
+ |
1263 |
cell division protein FtsA |
YP_002214084 |
decreased coverage |
0.0011437 |
normal |
0.628842 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0142 |
CDS |
NC_011205 |
151236 |
152387 |
+ |
1152 |
cell division protein FtsZ |
YP_002214085 |
decreased coverage |
0.000809484 |
normal |
0.893784 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0389 |
CDS |
NC_011205 |
406724 |
408682 |
+ |
1959 |
type III restriction-modification system StyLTI enzyme mod |
YP_002214310 |
normal |
1 |
decreased coverage |
1.57999e-20 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0584 |
CDS |
NC_011205 |
601886 |
602380 |
- |
495 |
peptidyl-prolyl cis-trans isomerase B (rotamase B) |
YP_002214491 |
decreased coverage |
0.00143281 |
normal |
0.41238 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0618 |
CDS |
NC_011205 |
625876 |
626073 |
+ |
198 |
hypothetical protein |
YP_002214521 |
normal |
0.374768 |
decreased coverage |
0.000963461 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0619 |
CDS |
NC_011205 |
626220 |
626429 |
+ |
210 |
hypothetical protein |
YP_002214522 |
normal |
0.570933 |
decreased coverage |
0.000948316 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0620 |
CDS |
NC_011205 |
626465 |
627388 |
- |
924 |
hypothetical protein |
YP_002214523 |
normal |
1 |
decreased coverage |
0.00146691 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0624 |
CDS |
NC_011205 |
629058 |
629891 |
+ |
834 |
DNA replication protein gp18 |
YP_002214527 |
normal |
1 |
decreased coverage |
0.00127495 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A0832 |
CDS |
NC_011205 |
830844 |
832010 |
+ |
1167 |
succinyl-CoA synthetase subunit beta |
YP_002214706 |
decreased coverage |
0.00412785 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1078 |
CDS |
NC_011205 |
1081217 |
1084405 |
- |
3189 |
gifsy-1 prophage RecE |
YP_002214937 |
normal |
0.673362 |
decreased coverage |
0.00000173114 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1255 |
CDS |
NC_011205 |
1250284 |
1250406 |
+ |
123 |
hypothetical protein |
YP_002215100 |
decreased coverage |
0.00474032 |
normal |
0.887463 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1281 |
CDS |
NC_011205 |
1267503 |
1267871 |
- |
369 |
flagellar biosynthesis protein FliT |
YP_002215125 |
decreased coverage |
0.000909072 |
normal |
0.322252 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1320 |
CDS |
NC_011205 |
1296707 |
1297285 |
+ |
579 |
transcriptional activator FlhC |
YP_002215158 |
unclonable |
0.0000170782 |
decreased coverage |
3.16651e-27 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1321 |
CDS |
NC_011205 |
1297410 |
1298297 |
+ |
888 |
flagellar motor protein MotA |
YP_002215159 |
normal |
0.142338 |
decreased coverage |
5.03142e-27 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1432 |
CDS |
NC_011205 |
1399187 |
1400266 |
- |
1080 |
integrase |
YP_002215264 |
decreased coverage |
0.00370653 |
normal |
0.301971 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1468 |
CDS |
NC_011205 |
1423221 |
1423718 |
+ |
498 |
GAF domain-containing protein |
YP_002215294 |
decreased coverage |
0.000132233 |
normal |
0.144363 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1542 |
CDS |
NC_011205 |
1490911 |
1491081 |
+ |
171 |
hypothetical protein |
YP_002215364 |
decreased coverage |
0.00491769 |
normal |
0.0893384 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1543 |
CDS |
NC_011205 |
1491078 |
1491926 |
- |
849 |
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
YP_002215365 |
decreased coverage |
0.00558855 |
normal |
0.0908777 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1621 |
CDS |
NC_011205 |
1565608 |
1565916 |
+ |
309 |
hypothetical protein |
YP_002215434 |
decreased coverage |
0.000478704 |
decreased coverage |
6.99573e-22 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1622 |
CDS |
NC_011205 |
1565923 |
1567092 |
+ |
1170 |
tetratricopeptide repeat protein |
YP_002215435 |
decreased coverage |
0.000649442 |
decreased coverage |
2.66656e-22 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1624 |
CDS |
NC_011205 |
1567142 |
1567267 |
- |
126 |
hypothetical protein |
YP_002215436 |
hitchhiker |
0.0012329 |
decreased coverage |
6.15545e-22 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1698 |
CDS |
NC_011205 |
1633353 |
1637273 |
+ |
3921 |
ATP-dependent RNA helicase HrpA |
YP_002215507 |
normal |
0.615295 |
decreased coverage |
0.00323043 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1827 |
CDS |
NC_011205 |
1769427 |
1770113 |
+ |
687 |
GntR family transcriptional regulator |
YP_002215627 |
decreased coverage |
0.000849458 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1872 |
CDS |
NC_011205 |
1810414 |
1811715 |
+ |
1302 |
sensor protein RstB |
YP_002215666 |
decreased coverage |
0.00123019 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1873 |
CDS |
NC_011205 |
1811791 |
1812720 |
+ |
930 |
DNA replication terminus site-binding protein |
YP_002215667 |
decreased coverage |
0.00330018 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1913 |
CDS |
NC_011205 |
1849103 |
1850128 |
+ |
1026 |
DNA-binding transcriptional repressor PurR |
YP_002215704 |
decreased coverage |
0.000592501 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1914 |
CDS |
NC_011205 |
1850125 |
1851057 |
- |
933 |
putative DNA-binding transcriptional regulator |
YP_002215705 |
decreased coverage |
0.000429246 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1918 |
CDS |
NC_011205 |
1854713 |
1856086 |
+ |
1374 |
multidrug efflux protein |
YP_002215709 |
decreased coverage |
0.00462926 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A1965 |
CDS |
NC_011205 |
1898396 |
1898632 |
+ |
237 |
major outer membrane lipoprotein |
YP_002215750 |
unclonable |
0.00000537115 |
decreased coverage |
0.000000000167771 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2094 |
CDS |
NC_011205 |
2017510 |
2017698 |
+ |
189 |
hypothetical protein |
YP_002215871 |
unclonable |
0.00000279182 |
decreased coverage |
0.0000000248657 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2171 |
CDS |
NC_011205 |
2084391 |
2085200 |
- |
810 |
4-amino-4-deoxychorismate lyase |
YP_002215940 |
normal |
0.216662 |
decreased coverage |
0.000000000000025967 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2172 |
CDS |
NC_011205 |
2085324 |
2086565 |
- |
1242 |
3-oxoacyl-(acyl carrier protein) synthase II |
YP_002215941 |
normal |
0.0165662 |
decreased coverage |
0.0000000000000469452 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2174 |
CDS |
NC_011205 |
2087043 |
2087777 |
- |
735 |
3-ketoacyl-(acyl-carrier-protein) reductase |
YP_002215943 |
hitchhiker |
0.000160421 |
decreased coverage |
0.0000000000000218664 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2175 |
CDS |
NC_011205 |
2087790 |
2088719 |
- |
930 |
malonyl CoA-acyl carrier protein transacylase |
YP_002215944 |
hitchhiker |
0.00200572 |
decreased coverage |
0.0000000000000303555 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2180 |
CDS |
NC_011205 |
2091925 |
2092509 |
+ |
585 |
Maf-like protein |
YP_002215949 |
decreased coverage |
0.000292018 |
hitchhiker |
0.00000000000623683 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2181 |
ncRNA |
NC_011205 |
2091764 |
2091931 |
- |
168 |
SraB RNA |
|
decreased coverage |
0.0000964894 |
hitchhiker |
0.0000000000036206 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2182 |
CDS |
NC_011205 |
2092580 |
2092804 |
- |
225 |
hypothetical protein |
YP_002215950 |
decreased coverage |
0.000112944 |
hitchhiker |
0.00000000000386488 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2184 |
|
NC_011205 |
2093007 |
2093767 |
- |
761 |
|
|
decreased coverage |
0.000429246 |
hitchhiker |
0.00000000000725915 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2276 |
CDS |
NC_011205 |
2169792 |
2170268 |
- |
477 |
lysozyme |
YP_002216036 |
decreased coverage |
0.00766878 |
hitchhiker |
1.42848e-18 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2279 |
CDS |
NC_011205 |
2172048 |
2173043 |
- |
996 |
hypothetical protein |
YP_002216039 |
decreased coverage |
0.00859838 |
hitchhiker |
4.1808499999999996e-21 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2280 |
CDS |
NC_011205 |
2173045 |
2173905 |
- |
861 |
KilA-N domain-containing protein |
YP_002216040 |
normal |
0.0187873 |
decreased coverage |
1.7596300000000002e-23 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2283 |
CDS |
NC_011205 |
2175198 |
2175671 |
- |
474 |
hypothetical protein |
YP_002216043 |
normal |
0.89521 |
decreased coverage |
1.1409300000000001e-23 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2433 |
|
NC_011205 |
2305791 |
2306765 |
- |
975 |
|
|
normal |
1 |
decreased coverage |
0.0000697737 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2434 |
CDS |
NC_011205 |
2306771 |
2307319 |
- |
549 |
dTDP-4-dehydrorhamnose 3,5-epimerase |
YP_002216181 |
normal |
1 |
decreased coverage |
0.0000547292 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2436 |
CDS |
NC_011205 |
2308249 |
2309148 |
- |
900 |
dTDP-4-dehydrorhamnose reductase |
YP_002216183 |
normal |
1 |
decreased coverage |
0.0000731521 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2557 |
CDS |
NC_011205 |
2437901 |
2438032 |
+ |
132 |
hypothetical protein |
YP_002216290 |
decreased coverage |
0.00740006 |
hitchhiker |
0.0000726871 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2562 |
CDS |
NC_011205 |
2441250 |
2441822 |
+ |
573 |
elongation factor P |
YP_002216295 |
normal |
0.015045 |
decreased coverage |
0.0000164335 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2563 |
CDS |
NC_011205 |
2442035 |
2443021 |
+ |
987 |
cobalamin synthesis protein, P47K |
YP_002216296 |
hitchhiker |
0.00261863 |
decreased coverage |
0.00000585707 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2564 |
CDS |
NC_011205 |
2443024 |
2443770 |
+ |
747 |
inner membrane protein YeiU |
YP_002216297 |
decreased coverage |
0.00168101 |
hitchhiker |
0.0000332566 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2652 |
CDS |
NC_011205 |
2536023 |
2536781 |
- |
759 |
acyl-CoA thioester hydrolase YfbB |
YP_002216376 |
decreased coverage |
0.00598559 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2676 |
CDS |
NC_011205 |
2561278 |
2562216 |
- |
939 |
HTH-type transcriptional regulator PecT |
YP_002216400 |
decreased coverage |
0.00370653 |
normal |
0.784227 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2697 |
CDS |
NC_011205 |
2580182 |
2580733 |
- |
552 |
phosphodiesterase |
YP_002216419 |
decreased coverage |
0.000161935 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2745 |
CDS |
NC_011205 |
2623560 |
2624867 |
+ |
1308 |
long-chain fatty acid outer membrane transporter |
YP_002216462 |
decreased coverage |
0.00852795 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2780 |
tRNA |
NC_011205 |
2657979 |
2658054 |
+ |
76 |
tRNA-Val |
|
decreased coverage |
0.000064612 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2781 |
tRNA |
NC_011205 |
2658099 |
2658176 |
+ |
78 |
tRNA-Val |
|
decreased coverage |
0.0000634028 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2782 |
tRNA |
NC_011205 |
2658216 |
2658293 |
+ |
78 |
tRNA-Val |
|
decreased coverage |
0.0000628066 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2783 |
tRNA |
NC_011205 |
2658297 |
2658372 |
+ |
76 |
tRNA-Lys |
|
decreased coverage |
0.0000664691 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A2933 |
CDS |
NC_011205 |
2824172 |
2825716 |
+ |
1545 |
DNA-binding transcriptional activator CadC |
YP_002216624 |
decreased coverage |
0.00185207 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3033 |
CDS |
NC_011205 |
2930573 |
2932258 |
- |
1686 |
tail fiber domain-containing protein |
YP_002216709 |
normal |
1 |
decreased coverage |
0.000290271 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3034 |
CDS |
NC_011205 |
2932255 |
2932860 |
- |
606 |
phage tail protein I |
YP_002216710 |
normal |
0.8346 |
decreased coverage |
0.00021132 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3035 |
CDS |
NC_011205 |
2932853 |
2933761 |
- |
909 |
baseplate assembly protein J |
YP_002216711 |
normal |
0.805786 |
decreased coverage |
0.000161965 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3138 |
CDS |
NC_011205 |
3019242 |
3020303 |
- |
1062 |
recombinase A |
YP_002216800 |
normal |
1 |
decreased coverage |
0.000383703 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3139 |
CDS |
NC_011205 |
3020388 |
3020885 |
- |
498 |
competence damage-inducible protein A |
YP_002216801 |
normal |
1 |
decreased coverage |
0.000242069 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3147 |
CDS |
NC_011205 |
3026793 |
3027758 |
+ |
966 |
D-arabinose 5-phosphate isomerase |
YP_002216809 |
decreased coverage |
0.00650637 |
normal |
0.0214142 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3148 |
CDS |
NC_011205 |
3027755 |
3029275 |
- |
1521 |
anaerobic nitric oxide reductase transcription regulator |
YP_002216810 |
decreased coverage |
0.00147569 |
normal |
0.0293519 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3308 |
ncRNA |
NC_011205 |
3183064 |
3183210 |
+ |
147 |
GcvB RNA |
|
decreased coverage |
0.000406754 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3309 |
CDS |
NC_011205 |
3183283 |
3183510 |
- |
228 |
putative lipoprotein |
YP_002216959 |
decreased coverage |
0.00054484 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3330 |
CDS |
NC_011205 |
3207656 |
3209902 |
- |
2247 |
fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain |
YP_002216976 |
normal |
0.0459028 |
decreased coverage |
0.00181307 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3427 |
|
NC_011205 |
3293821 |
3293937 |
+ |
117 |
|
|
normal |
1 |
decreased coverage |
0.000571641 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3428 |
CDS |
NC_011205 |
3294154 |
3294903 |
- |
750 |
Uxu operon transcriptional regulator |
YP_002217060 |
normal |
1 |
decreased coverage |
0.000900091 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3430 |
CDS |
NC_011205 |
3295984 |
3297882 |
- |
1899 |
arginine decarboxylase |
YP_002217062 |
normal |
1 |
decreased coverage |
0.000516135 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3436 |
CDS |
NC_011205 |
3302463 |
3303170 |
+ |
708 |
endonuclease I |
YP_002217068 |
decreased coverage |
0.00127424 |
hitchhiker |
0.00168464 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3662 |
CDS |
NC_011205 |
3513334 |
3513591 |
- |
258 |
50S ribosomal protein L27 |
YP_002217275 |
decreased coverage |
0.0000324123 |
normal |
0.0701159 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3664 |
CDS |
NC_011205 |
3514039 |
3515151 |
+ |
1113 |
octaprenyl diphosphate synthase |
YP_002217276 |
decreased coverage |
0.000479372 |
normal |
0.0578061 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3745 |
CDS |
NC_011205 |
3596094 |
3597059 |
+ |
966 |
tRNA-dihydrouridine synthase B |
YP_002217354 |
decreased coverage |
0.000576344 |
normal |
0.0689485 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3746 |
CDS |
NC_011205 |
3597085 |
3597381 |
+ |
297 |
DNA-binding protein Fis |
YP_002217355 |
decreased coverage |
0.000657586 |
normal |
0.0919555 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3747 |
CDS |
NC_011205 |
3597467 |
3598351 |
+ |
885 |
putative methyltransferase |
YP_002217356 |
decreased coverage |
0.00189132 |
normal |
0.187537 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A3855 |
CDS |
NC_011205 |
3682166 |
3682687 |
- |
522 |
shikimate kinase I |
YP_002217448 |
decreased coverage |
0.0000716125 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A4302 |
CDS |
NC_011205 |
4150420 |
4151901 |
- |
1482 |
guanosine pentaphosphate phosphohydrolase |
YP_002217851 |
decreased coverage |
0.00653056 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A4556 |
CDS |
NC_011205 |
4394420 |
4395124 |
+ |
705 |
50S ribosomal protein L1 |
YP_002218067 |
normal |
0.103924 |
decreased coverage |
0.00000000000032652 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A4750 |
tRNA |
NC_011205 |
4609165 |
4609240 |
+ |
76 |
tRNA-Gly |
|
decreased coverage |
0.000206378 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A4751 |
tRNA |
NC_011205 |
4609397 |
4609472 |
+ |
76 |
tRNA-Gly |
|
decreased coverage |
0.000215477 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A4753 |
CDS |
NC_011205 |
4609742 |
4610896 |
- |
1155 |
putative iron-sulfur cluster binding protein |
YP_002218239 |
decreased coverage |
0.00412785 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A4791 |
CDS |
NC_011205 |
4644649 |
4645575 |
+ |
927 |
hypothetical protein |
YP_002218276 |
decreased coverage |
0.00231071 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A4865 |
CDS |
NC_011205 |
4715900 |
4716982 |
+ |
1083 |
inner membrane protein YjgQ |
YP_002218343 |
decreased coverage |
0.000705517 |
normal |
0.203916 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_A4899 |
CDS |
NC_011205 |
4739999 |
4741624 |
- |
1626 |
putative SAM-dependent methyltransferase |
YP_002218368 |
normal |
1 |
decreased coverage |
0.00310573 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_B0058 |
CDS |
NC_011204 |
32325 |
33119 |
+ |
795 |
hypothetical protein |
YP_002213900 |
decreased coverage |
0.00740198 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_B0059 |
|
NC_011204 |
33405 |
33769 |
+ |
365 |
|
|
decreased coverage |
0.00206792 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_B0062 |
|
NC_011204 |
34017 |
34193 |
+ |
177 |
|
|
decreased coverage |
0.00586485 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_B0063 |
CDS |
NC_011204 |
34454 |
34576 |
- |
123 |
hypothetical protein |
YP_002213901 |
decreased coverage |
0.00921812 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_B0115 |
CDS |
NC_011204 |
69241 |
69522 |
- |
282 |
putative stability protein StbE |
YP_002213945 |
decreased coverage |
0.000821269 |
normal |
0.655848 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_B0116 |
CDS |
NC_011204 |
69512 |
69763 |
- |
252 |
putative stability protein StbD |
YP_002213946 |
decreased coverage |
0.000696013 |
normal |
0.795005 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |
| SeD_B0117 |
CDS |
NC_011204 |
69760 |
69960 |
- |
201 |
hypothetical protein |
YP_002213947 |
decreased coverage |
0.00059346 |
normal |
0.862624 |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Bacteria |
|
|
- |