35 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Aboo_0089  CDS  NC_013926  86701  88137  -  1437  FAD-dependent pyridine nucleotide-disulfide oxidoreductase  YP_003482463  decreased coverage  0.000828017  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0132  CDS  NC_013926  127831  130323  +  2493  hypothetical protein  YP_003482506  decreased coverage  0.00263601  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0173  CDS  NC_013926  185166  185879  -  714  ABC-2 type transporter  YP_003482547  decreased coverage  0.00869778  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0182  CDS  NC_013926  190038  190775  -  738  exosome complex exonuclease 1  YP_003482556  decreased coverage  0.0000282409  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0183  CDS  NC_013926  190759  191451  -  693  K-like, type 1, subgroup  YP_003482557  decreased coverage  0.00000922938  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0250  CDS  NC_013926  255320  256354  -  1035  glycosyl transferase family 2  YP_003482624  decreased coverage  0.0000000444925  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0253  CDS  NC_013926  259054  260361  -  1308  polysaccharide biosynthesis protein  YP_003482627  decreased coverage  0.00000123579  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0340  CDS  NC_013926  344536  344940  +  405  protein of unknown function DUF35  YP_003482713  decreased coverage  0.0000262786  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0407  CDS  NC_013926  406123  407709  +  1587  extracellular solute-binding protein family 5  YP_003482780  decreased coverage  0.00229954  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0464  CDS  NC_013926  452466  453785  +  1320  L-lysine 6-transaminase  YP_003482837  decreased coverage  0.00767316  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0536  CDS  NC_013926  520956  522011  +  1056  3-dehydroquinate synthase  YP_003482909  decreased coverage  0.00000000695262  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0571  CDS  NC_013926  550593  551066  +  474  small GTP-binding protein  YP_003482944  decreased coverage  0.0000000068839  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0572  CDS  NC_013926  551063  551932  +  870  tRNA intron endonuclease  YP_003482945  decreased coverage  0.000000000000753451  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0617  CDS  NC_013926  592041  592892  +  852  peptidase S15  YP_003482990  decreased coverage  0.000016795  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0618  CDS  NC_013926  592886  593485  -  600  hypothetical protein  YP_003482991  decreased coverage  0.00000113896  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0711  CDS  NC_013926  675286  676233  -  948  Transketolase central region  YP_003483084  decreased coverage  0.00000202012  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0731  CDS  NC_013926  693596  694786  +  1191  Glycine C-acetyltransferase  YP_003483104  decreased coverage  0.000138233  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0749  CDS  NC_013926  710802  712019  +  1218  ammonium transporter  YP_003483120  decreased coverage  0.0000261873  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_0773  CDS  NC_013926  731845  733632  -  1788  NADH/Ubiquinone/plastoquinone (complex I)  YP_003483144  decreased coverage  0.00397311  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1004  CDS  NC_013926  965698  965997  -  300  hypothetical protein  YP_003483375  decreased coverage  0.00000000000000187126  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1005  CDS  NC_013926  966012  966212  -  201  hypothetical protein  YP_003483376  decreased coverage  0.00000000000000113566  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1006  CDS  NC_013926  966209  966406  -  198  hypothetical protein  YP_003483377  decreased coverage  0.00000000000000128984  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1007  CDS  NC_013926  966403  966594  -  192  hypothetical protein  YP_003483378  decreased coverage  0.00000000000000130329  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1008  CDS  NC_013926  966591  966782  -  192  K08849 mixed lineage kinase domain-like protein  YP_003483379  decreased coverage  0.00000000000000109155  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1009  CDS  NC_013926  966779  968089  -  1311  hypothetical protein  YP_003483380  decreased coverage  0.00000000000366199  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1013  CDS  NC_013926  972531  973193  +  663  hypothetical protein  YP_003483384  decreased coverage  0.0000000000858271  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1024  CDS  NC_013926  984518  985660  -  1143  CRISPR-associated RAMP protein, Csm5 family  YP_003483395  decreased coverage  0.00000034991  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1090  CDS  NC_013926  1045102  1047789  -  2688  DNA-directed RNA polymerase subunit A'  YP_003483461  decreased coverage  0.0000457669  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1094  CDS  NC_013926  1052546  1052908  -  363  diacylglycerol kinase  YP_003483465  decreased coverage  0.000224255  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1115  CDS  NC_013926  1068811  1070496  +  1686  Aldehyde ferredoxin oxidoreductase  YP_003483486  decreased coverage  0.000328009  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1135  CDS  NC_013926  1088237  1089904  +  1668  glutamate formiminotransferase  YP_003483506  decreased coverage  0.000000259237  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1295  CDS  NC_013926  1241609  1242268  +  660  putative cytoplasmic protein  YP_003483665  decreased coverage  0.00243456  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1296  CDS  NC_013926  1242290  1243573  +  1284  proteinase inhibitor I4 serpin  YP_003483666  decreased coverage  0.00386806  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_1468  CDS  NC_013926  1407419  1408636  +  1218  guanine deaminase  YP_003483836  decreased coverage  0.00567224  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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Aboo_R0035  tRNA  NC_013926  1408663  1408734  +  72  tRNA-Cys    decreased coverage  0.00020868  n/a    Aciduliprofundum boonei T469  Archaea 
 
 
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