| Ssed_0028 |
CDS |
NC_009831 |
34180 |
34488 |
- |
309 |
regulatory protein, ArsR |
YP_001471769 |
decreased coverage |
0.0000136281 |
normal |
0.0492639 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0039 |
CDS |
NC_009831 |
45367 |
47139 |
- |
1773 |
collagenase |
YP_001471780 |
decreased coverage |
0.0000449009 |
normal |
0.0513701 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0093 |
CDS |
NC_009831 |
102991 |
103689 |
- |
699 |
hypothetical protein |
YP_001471834 |
normal |
0.0397586 |
decreased coverage |
0.00000860939 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0094 |
CDS |
NC_009831 |
104402 |
105022 |
- |
621 |
cytochrome c, class I |
YP_001471835 |
hitchhiker |
0.00310871 |
decreased coverage |
0.00000781089 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0096 |
CDS |
NC_009831 |
106612 |
109413 |
- |
2802 |
DNA-directed DNA polymerase |
YP_001471837 |
decreased coverage |
0.00741762 |
hitchhiker |
0.000000822051 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0117 |
CDS |
NC_009831 |
130893 |
131714 |
- |
822 |
formamidopyrimidine-DNA glycosylase |
YP_001471858 |
decreased coverage |
0.00226258 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0262 |
CDS |
NC_009831 |
296434 |
297876 |
+ |
1443 |
peptidase M16 domain-containing protein |
YP_001472003 |
decreased coverage |
0.000120782 |
normal |
0.152415 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0280 |
CDS |
NC_009831 |
316789 |
317295 |
+ |
507 |
protein of unknown function, Spy-related |
YP_001472021 |
decreased coverage |
0.00000525037 |
unclonable |
0.0000000000829203 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0281 |
CDS |
NC_009831 |
317399 |
318268 |
+ |
870 |
cation diffusion facilitator family transporter |
YP_001472022 |
decreased coverage |
0.0000230949 |
unclonable |
0.000000000100578 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0357 |
CDS |
NC_009831 |
416026 |
418128 |
- |
2103 |
hypothetical protein |
YP_001472098 |
decreased coverage |
0.000745858 |
hitchhiker |
0.00573689 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0383 |
CDS |
NC_009831 |
448601 |
449059 |
- |
459 |
deoxyuridine 5'-triphosphate nucleotidohydrolase |
YP_001472124 |
decreased coverage |
0.000000980059 |
unclonable |
0.0000000000523361 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0426 |
CDS |
NC_009831 |
518556 |
518966 |
- |
411 |
methylation site containing protein |
YP_001472167 |
decreased coverage |
0.000000282584 |
hitchhiker |
0.000848946 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0435 |
CDS |
NC_009831 |
534359 |
536614 |
+ |
2256 |
patatin |
YP_001472176 |
hitchhiker |
0.00139608 |
decreased coverage |
0.00000000672418 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0436 |
CDS |
NC_009831 |
536775 |
538829 |
+ |
2055 |
endothelin-converting protein 1 |
YP_001472177 |
unclonable |
0.00000525642 |
decreased coverage |
0.00000000576853 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0532 |
CDS |
NC_009831 |
649764 |
650330 |
- |
567 |
sporulation domain-containing protein |
YP_001472272 |
decreased coverage |
0.00323787 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0588 |
CDS |
NC_009831 |
717378 |
718286 |
+ |
909 |
hypothetical protein |
YP_001472328 |
decreased coverage |
0.0000146469 |
decreased coverage |
0.00000240806 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0589 |
CDS |
NC_009831 |
718427 |
719533 |
+ |
1107 |
hypothetical protein |
YP_001472329 |
hitchhiker |
0.00223156 |
decreased coverage |
0.00000261848 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0590 |
CDS |
NC_009831 |
719671 |
720528 |
+ |
858 |
hypothetical protein |
YP_001472330 |
hitchhiker |
0.00339464 |
decreased coverage |
0.00000221441 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0610 |
CDS |
NC_009831 |
737723 |
738352 |
+ |
630 |
hypothetical protein |
YP_001472350 |
decreased coverage |
0.000000882813 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0616 |
CDS |
NC_009831 |
744827 |
746014 |
+ |
1188 |
hypothetical protein |
YP_001472356 |
decreased coverage |
0.0000317994 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0660 |
CDS |
NC_009831 |
799872 |
801038 |
+ |
1167 |
hypothetical protein |
YP_001472400 |
decreased coverage |
0.0000211177 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0681 |
CDS |
NC_009831 |
821871 |
822764 |
- |
894 |
phospholipase A(1) |
YP_001472420 |
decreased coverage |
0.00937714 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0708 |
CDS |
NC_009831 |
854106 |
855473 |
+ |
1368 |
hypothetical protein |
YP_001472447 |
unclonable |
0.000000336501 |
decreased coverage |
0.0000114896 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0815 |
CDS |
NC_009831 |
968335 |
969054 |
- |
720 |
two-component response regulator |
YP_001472554 |
unclonable |
0.0000000717024 |
decreased coverage |
0.00000744043 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0877 |
CDS |
NC_009831 |
1044805 |
1045869 |
+ |
1065 |
fructose-1,6-bisphosphate aldolase |
YP_001472616 |
decreased coverage |
0.00000290228 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0907 |
CDS |
NC_009831 |
1083952 |
1085595 |
+ |
1644 |
L-lactate permease |
YP_001472646 |
normal |
0.425278 |
decreased coverage |
0.000000225287 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0966 |
CDS |
NC_009831 |
1147724 |
1149028 |
- |
1305 |
PpiC-type peptidyl-prolyl cis-trans isomerase |
YP_001472705 |
decreased coverage |
0.0000138448 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0967 |
CDS |
NC_009831 |
1149150 |
1151474 |
- |
2325 |
organic solvent tolerance protein |
YP_001472706 |
decreased coverage |
0.000267662 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0974 |
CDS |
NC_009831 |
1157515 |
1157922 |
+ |
408 |
hypothetical protein |
YP_001472713 |
decreased coverage |
0.000000285337 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_0975 |
CDS |
NC_009831 |
1157924 |
1159060 |
+ |
1137 |
secretion protein HlyD family protein |
YP_001472714 |
decreased coverage |
0.0000270967 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1028 |
CDS |
NC_009831 |
1224666 |
1225883 |
+ |
1218 |
peptidase M24 |
YP_001472767 |
decreased coverage |
0.00000479097 |
normal |
0.388607 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1082 |
CDS |
NC_009831 |
1282834 |
1283835 |
+ |
1002 |
ErfK/YbiS/YcfS/YnhG family protein |
YP_001472821 |
decreased coverage |
0.00000431634 |
normal |
0.0168034 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1083 |
CDS |
NC_009831 |
1284101 |
1284367 |
- |
267 |
major outer membrane lipoprotein, putative |
YP_001472822 |
decreased coverage |
0.000000293694 |
normal |
0.0136333 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1084 |
CDS |
NC_009831 |
1284578 |
1285819 |
- |
1242 |
metal dependent phosphohydrolase |
YP_001472823 |
decreased coverage |
0.00000542192 |
normal |
0.0207195 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1093 |
CDS |
NC_009831 |
1296854 |
1298563 |
- |
1710 |
Cl-channel, voltage-gated family protein |
YP_001472832 |
decreased coverage |
0.00228292 |
decreased coverage |
0.00554461 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1094 |
CDS |
NC_009831 |
1298660 |
1299499 |
+ |
840 |
hypothetical protein |
YP_001472833 |
hitchhiker |
0.00105503 |
decreased coverage |
0.00393071 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1095 |
CDS |
NC_009831 |
1299626 |
1299988 |
+ |
363 |
iron-sulfur cluster insertion protein ErpA |
YP_001472834 |
hitchhiker |
0.00345667 |
decreased coverage |
0.0031611 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1098 |
CDS |
NC_009831 |
1301267 |
1302688 |
- |
1422 |
putative alkaline phosphatase |
YP_001472837 |
normal |
0.374892 |
decreased coverage |
0.00462057 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1099 |
CDS |
NC_009831 |
1302713 |
1305289 |
- |
2577 |
peptidase S9 prolyl oligopeptidase |
YP_001472838 |
normal |
1 |
decreased coverage |
0.00716839 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1184 |
CDS |
NC_009831 |
1407316 |
1408953 |
- |
1638 |
glucose-6-phosphate isomerase |
YP_001472923 |
decreased coverage |
0.00253768 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1192 |
CDS |
NC_009831 |
1418267 |
1419826 |
+ |
1560 |
integral membrane protein MviN |
YP_001472931 |
decreased coverage |
0.0000262812 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1193 |
CDS |
NC_009831 |
1419924 |
1420859 |
+ |
936 |
riboflavin biosynthesis protein RibF |
YP_001472932 |
decreased coverage |
0.00000237633 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1215 |
CDS |
NC_009831 |
1448119 |
1449423 |
+ |
1305 |
glucose/galactose transporter |
YP_001472954 |
decreased coverage |
0.00000975208 |
normal |
0.526597 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1216 |
CDS |
NC_009831 |
1451197 |
1451748 |
+ |
552 |
cytochrome b561 |
YP_001472955 |
decreased coverage |
0.00000559854 |
normal |
0.299312 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1217 |
CDS |
NC_009831 |
1451830 |
1452408 |
+ |
579 |
hypothetical protein |
YP_001472956 |
decreased coverage |
0.00000670198 |
normal |
0.302127 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1218 |
CDS |
NC_009831 |
1452564 |
1452842 |
- |
279 |
hypothetical protein |
YP_001472957 |
decreased coverage |
0.00000284712 |
normal |
0.540197 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1219 |
CDS |
NC_009831 |
1452845 |
1453957 |
- |
1113 |
A/G-specific adenine glycosylase |
YP_001472958 |
decreased coverage |
0.0000411331 |
normal |
0.458065 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1220 |
CDS |
NC_009831 |
1454173 |
1454889 |
+ |
717 |
tRNA (guanine-N(7)-)-methyltransferase |
YP_001472959 |
decreased coverage |
0.000013255 |
normal |
0.296517 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1227 |
CDS |
NC_009831 |
1462438 |
1463040 |
- |
603 |
putative deoxyribonucleotide triphosphate pyrophosphatase |
YP_001472966 |
decreased coverage |
0.000000551946 |
normal |
0.198149 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1228 |
CDS |
NC_009831 |
1463240 |
1463674 |
- |
435 |
hypothetical protein |
YP_001472967 |
decreased coverage |
0.000000394867 |
normal |
0.28109 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1229 |
CDS |
NC_009831 |
1463777 |
1464064 |
- |
288 |
hypothetical protein |
YP_001472968 |
decreased coverage |
0.000000279733 |
normal |
0.270499 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1230 |
CDS |
NC_009831 |
1464064 |
1464612 |
- |
549 |
protein of unknown function YGGT |
YP_001472969 |
decreased coverage |
0.000000825612 |
normal |
0.409234 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1340 |
CDS |
NC_009831 |
1595219 |
1596106 |
+ |
888 |
hypothetical protein |
YP_001473079 |
decreased coverage |
0.00430506 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1341 |
CDS |
NC_009831 |
1596266 |
1596835 |
+ |
570 |
putative lipoprotein |
YP_001473080 |
decreased coverage |
0.00268947 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1434 |
CDS |
NC_009831 |
1699270 |
1699890 |
+ |
621 |
tetratricopeptide TPR_4 |
YP_001473173 |
decreased coverage |
0.0000778847 |
normal |
0.941681 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1449 |
CDS |
NC_009831 |
1720444 |
1721022 |
+ |
579 |
thymidine kinase |
YP_001473188 |
decreased coverage |
0.000965494 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1467 |
CDS |
NC_009831 |
1741906 |
1742295 |
+ |
390 |
hypothetical protein |
YP_001473206 |
hitchhiker |
0.00000434659 |
decreased coverage |
0.0000172083 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1468 |
CDS |
NC_009831 |
1742405 |
1742998 |
+ |
594 |
hypothetical protein |
YP_001473207 |
decreased coverage |
0.000000729237 |
decreased coverage |
0.0000188796 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1469 |
CDS |
NC_009831 |
1743333 |
1743980 |
+ |
648 |
outer membrane protein W |
YP_001473208 |
decreased coverage |
0.000000900043 |
hitchhiker |
0.0000643724 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1479 |
CDS |
NC_009831 |
1754484 |
1755242 |
+ |
759 |
3-ketoacyl-(acyl-carrier-protein) reductase |
YP_001473218 |
decreased coverage |
0.00339464 |
normal |
0.0679192 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1498 |
CDS |
NC_009831 |
1779969 |
1782032 |
- |
2064 |
methyl-accepting chemotaxis sensory transducer |
YP_001473237 |
decreased coverage |
0.000111484 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1499 |
CDS |
NC_009831 |
1782455 |
1783309 |
- |
855 |
hypothetical protein |
YP_001473238 |
decreased coverage |
0.000002161 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1500 |
CDS |
NC_009831 |
1783547 |
1784047 |
- |
501 |
amino acid-binding ACT domain-containing protein |
YP_001473239 |
decreased coverage |
0.000000613254 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1569 |
CDS |
NC_009831 |
1873498 |
1876107 |
+ |
2610 |
TonB-dependent receptor |
YP_001473308 |
unclonable |
0.0000550471 |
decreased coverage |
0.0000000582733 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1579 |
CDS |
NC_009831 |
1885416 |
1885694 |
+ |
279 |
PpiC-type peptidyl-prolyl cis-trans isomerase |
YP_001473318 |
decreased coverage |
0.00738577 |
normal |
0.154492 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1615 |
CDS |
NC_009831 |
1928108 |
1929151 |
- |
1044 |
RND family efflux transporter MFP subunit |
YP_001473354 |
hitchhiker |
0.0000338384 |
decreased coverage |
0.00000142207 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1616 |
CDS |
NC_009831 |
1929311 |
1930027 |
- |
717 |
hypothetical protein |
YP_001473355 |
hitchhiker |
0.00000200247 |
decreased coverage |
0.000000163604 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1617 |
CDS |
NC_009831 |
1930111 |
1930494 |
- |
384 |
hypothetical protein |
YP_001473356 |
hitchhiker |
0.000000562608 |
decreased coverage |
0.000000795999 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1618 |
CDS |
NC_009831 |
1930627 |
1931949 |
- |
1323 |
aromatic hydrocarbon degradation membrane protein |
YP_001473357 |
unclonable |
0.00000079524 |
decreased coverage |
0.00000000170841 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1619 |
CDS |
NC_009831 |
1932317 |
1933768 |
- |
1452 |
sodium/proline symporter |
YP_001473358 |
hitchhiker |
0.000146301 |
decreased coverage |
0.00000122936 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1644 |
CDS |
NC_009831 |
1965031 |
1966242 |
+ |
1212 |
beta-ketoacyl synthase |
YP_001473383 |
decreased coverage |
0.00348297 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1670 |
CDS |
NC_009831 |
2001014 |
2001565 |
- |
552 |
intracellular septation protein A |
YP_001473409 |
decreased coverage |
0.000000643505 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1671 |
CDS |
NC_009831 |
2001694 |
2003211 |
- |
1518 |
type II secretory pathway ATPase ExeA |
YP_001473410 |
decreased coverage |
0.0000168756 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1761 |
CDS |
NC_009831 |
2116462 |
2117463 |
- |
1002 |
hydroxyproline-2-epimerase |
YP_001473500 |
decreased coverage |
0.0000415144 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1808 |
CDS |
NC_009831 |
2179647 |
2181431 |
- |
1785 |
sulfatase |
YP_001473547 |
decreased coverage |
0.00146351 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1872 |
CDS |
NC_009831 |
2257426 |
2260485 |
+ |
3060 |
D-lactate dehydrogenase (cytochrome) |
YP_001473611 |
normal |
1 |
decreased coverage |
0.0000000561674 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1873 |
CDS |
NC_009831 |
2260568 |
2261008 |
+ |
441 |
hypothetical protein |
YP_001473612 |
normal |
1 |
decreased coverage |
0.0000000126368 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1874 |
CDS |
NC_009831 |
2261121 |
2261540 |
+ |
420 |
MarR family transcriptional regulator |
YP_001473613 |
normal |
1 |
decreased coverage |
0.0000000119555 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1875 |
CDS |
NC_009831 |
2261611 |
2262015 |
+ |
405 |
hypothetical protein |
YP_001473614 |
normal |
0.989179 |
decreased coverage |
0.0000000115207 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1876 |
CDS |
NC_009831 |
2262036 |
2262380 |
- |
345 |
hypothetical protein |
YP_001473615 |
normal |
1 |
decreased coverage |
0.0000000114126 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1882 |
CDS |
NC_009831 |
2267919 |
2268629 |
- |
711 |
pseudouridine synthase, Rsu |
YP_001473621 |
normal |
0.733285 |
decreased coverage |
0.0000000160719 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1883 |
CDS |
NC_009831 |
2269013 |
2271238 |
+ |
2226 |
isocitrate dehydrogenase (NADP(+)) |
YP_001473622 |
normal |
0.615158 |
decreased coverage |
0.0000000395954 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1887 |
CDS |
NC_009831 |
2274522 |
2274740 |
- |
219 |
translation initiation factor IF-1 |
YP_001473626 |
decreased coverage |
0.0000185401 |
hitchhiker |
0.0000121311 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1950 |
CDS |
NC_009831 |
2352917 |
2353855 |
- |
939 |
hypothetical protein |
YP_001473687 |
decreased coverage |
0.00445675 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1983 |
CDS |
NC_009831 |
2397997 |
2399643 |
+ |
1647 |
methyl-accepting chemotaxis sensory transducer |
YP_001473720 |
decreased coverage |
0.000213036 |
normal |
0.437149 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1995 |
CDS |
NC_009831 |
2413006 |
2413830 |
- |
825 |
purine nucleoside phosphorylase |
YP_001473732 |
normal |
0.0661453 |
decreased coverage |
0.000000235429 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_1999 |
CDS |
NC_009831 |
2418841 |
2421288 |
- |
2448 |
acyl-CoA dehydrogenase |
YP_001473736 |
normal |
0.0412808 |
decreased coverage |
0.0000000639104 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2000 |
CDS |
NC_009831 |
2421529 |
2422308 |
+ |
780 |
glutamine amidotransferase, class-II |
YP_001473737 |
normal |
0.249396 |
decreased coverage |
0.000000243936 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2033 |
CDS |
NC_009831 |
2460697 |
2461314 |
+ |
618 |
Holliday junction DNA helicase RuvA |
YP_001473770 |
decreased coverage |
0.00030841 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2057 |
CDS |
NC_009831 |
2491071 |
2492906 |
- |
1836 |
peptidyl-dipeptidase A |
YP_001473794 |
decreased coverage |
0.0000365175 |
normal |
0.118156 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2058 |
CDS |
NC_009831 |
2493092 |
2494318 |
- |
1227 |
NAD/FAD-binding protein-like protein |
YP_001473795 |
decreased coverage |
0.00023874 |
normal |
0.0560685 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2067 |
CDS |
NC_009831 |
2502628 |
2504904 |
+ |
2277 |
acyl-CoA dehydrogenase |
YP_001473804 |
normal |
0.0937287 |
decreased coverage |
0.0000695411 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2068 |
CDS |
NC_009831 |
2505238 |
2506677 |
- |
1440 |
pyruvate kinase |
YP_001473805 |
hitchhiker |
0.000423476 |
decreased coverage |
0.0000129577 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2069 |
CDS |
NC_009831 |
2506862 |
2507716 |
- |
855 |
DNA-binding transcriptional regulator HexR |
YP_001473806 |
decreased coverage |
0.0000131353 |
hitchhiker |
0.000414379 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2092 |
CDS |
NC_009831 |
2534170 |
2534940 |
+ |
771 |
ABC cobalt transporter, periplasmic binding protein CbiN |
YP_001473829 |
decreased coverage |
0.0064068 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2093 |
CDS |
NC_009831 |
2534950 |
2535555 |
+ |
606 |
cobalamin (vitamin B12) biosynthesis CbiM protein |
YP_001473830 |
decreased coverage |
0.00179951 |
normal |
1 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2312 |
CDS |
NC_009831 |
2803811 |
2804824 |
+ |
1014 |
cytoplasmic asparaginase I |
YP_001474049 |
decreased coverage |
0.00000448344 |
hitchhiker |
0.000363201 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2313 |
CDS |
NC_009831 |
2804996 |
2805277 |
- |
282 |
hypothetical protein |
YP_001474050 |
decreased coverage |
0.000000279733 |
hitchhiker |
0.000293063 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2314 |
CDS |
NC_009831 |
2805274 |
2805591 |
- |
318 |
hypothetical protein |
YP_001474051 |
decreased coverage |
0.000000296556 |
hitchhiker |
0.000816285 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |
| Ssed_2315 |
CDS |
NC_009831 |
2805664 |
2806791 |
- |
1128 |
peptidase M14, carboxypeptidase A |
YP_001474052 |
decreased coverage |
0.00000568724 |
hitchhiker |
0.00110139 |
Shewanella sediminis HAW-EB3 |
Bacteria |
|
|
- |