24 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Mpe_B0040  CDS  NC_008826  33459  33947  -  489  hypothetical protein  YP_001023056  normal  1  decreased coverage  0.0000158895  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0041    NC_008826  34012  34458  -  447      normal  1  decreased coverage  0.0000154317  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0118  CDS  NC_008826  106140  106712  +  573  hypothetical protein  YP_001023132  normal  1  decreased coverage  0.000000209966  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0129  CDS  NC_008826  115472  116044  +  573  hypothetical protein  YP_001023143  decreased coverage  0.0017929  hitchhiker  0.0000435271  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0142  CDS  NC_008826  123526  124041  +  516  hypothetical protein  YP_001023155  decreased coverage  0.000000918158  hitchhiker  0.00103611  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0174  CDS  NC_008826  150723  153062  -  2340  hypothetical protein  YP_001023187  decreased coverage  0.00791399  hitchhiker  0.00018824  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0261  CDS  NC_008826  217241  217747  +  507  hypothetical protein  YP_001023271  normal  1  decreased coverage  0.0000777005  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0353  CDS  NC_008826  304366  304725  +  360  hypothetical protein  YP_001023363  decreased coverage  0.00695064  normal  0.533653  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0383  CDS  NC_008826  337099  337509  -  411  hypothetical protein  YP_001023393  decreased coverage  0.007698  normal  0.968839  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0401  CDS  NC_008826  353956  356511  +  2556  DNA topoisomerase  YP_001023411  normal  0.0152197  decreased coverage  0.0000578583  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0406  CDS  NC_008826  361252  361716  +  465  hypothetical protein  YP_001023416  decreased coverage  0.0000000753165  hitchhiker  0.0000486569  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0486  CDS  NC_008826  432667  433014  +  348  hypothetical protein  YP_001023493  decreased coverage  0.00104952  normal  1  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0490  CDS  NC_008826  438691  438963  -  273  hypothetical protein  YP_001023497  decreased coverage  0.000852193  normal  1  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0518  CDS  NC_008826  467796  469307  +  1512  adenosylcobyric acid synthase (glutamine-hydrolysing)  YP_001023525  decreased coverage  0.00186499  normal  0.0297746  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0537  CDS  NC_008826  487205  487951  -  747  GntR family transcriptional regulator  YP_001023542  normal  1  decreased coverage  0.00104238  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0538  CDS  NC_008826  487996  488406  +  411  methylmalonyl-CoA mutase C-terminal domain-containing protein  YP_001023543  normal  1  decreased coverage  0.000893241  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0539  CDS  NC_008826  488428  489861  +  1434  phenylacetate--CoA ligase  YP_001023544  normal  0.757808  decreased coverage  0.00138843  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0596  CDS  NC_008826  549026  549322  +  297  hypothetical protein  YP_001023595  normal  0.386476  decreased coverage  0.00000523964  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0597  CDS  NC_008826  549640  550917  -  1278  putative ferredoxin reductase  YP_001023596  normal  0.443962  decreased coverage  0.00000879766  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0598  CDS  NC_008826  551469  551801  -  333  hypothetical protein  YP_001023597  normal  0.395492  decreased coverage  0.0000042394  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0599  CDS  NC_008826  551842  552093  +  252  hypothetical protein  YP_001023598  normal  0.861878  decreased coverage  0.00000414358  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0600  CDS  NC_008826  552233  552586  +  354  hypothetical protein  YP_001023599  normal  1  decreased coverage  0.0000042394  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_B0601  CDS  NC_008826  552731  555436  -  2706  ATP-dependent transcriptional regulator-like protein protein  YP_001023600  normal  1  decreased coverage  0.00000493174  Methylibium petroleiphilum PM1  Bacteria 
 
 
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Mpe_BR0001  tRNA  NC_008826  243368  243443  +  76  tRNA-Gly    decreased coverage  0.00000164476  normal  0.13344  Methylibium petroleiphilum PM1  Bacteria 
 
 
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