| Dshi_0048 |
CDS |
NC_009952 |
47483 |
48445 |
- |
963 |
putative transposase |
YP_001531398 |
normal |
1 |
decreased coverage |
0.00000000000122957 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0049 |
CDS |
NC_009952 |
48547 |
48753 |
+ |
207 |
hypothetical protein |
YP_001531399 |
normal |
1 |
decreased coverage |
0.000000000000593849 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0087 |
CDS |
NC_009952 |
86213 |
86545 |
+ |
333 |
iojap-like protein |
YP_001531437 |
decreased coverage |
0.00113012 |
normal |
0.300811 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0337 |
CDS |
NC_009952 |
325428 |
326237 |
- |
810 |
chromosome partitioning ATPase protein-like protein |
YP_001531687 |
decreased coverage |
0.00565629 |
normal |
0.707159 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0444 |
CDS |
NC_009952 |
433725 |
434012 |
+ |
288 |
hypothetical protein |
YP_001531793 |
decreased coverage |
0.00689479 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0445 |
CDS |
NC_009952 |
434046 |
434438 |
+ |
393 |
hypothetical protein |
YP_001531794 |
decreased coverage |
0.00422073 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0447 |
CDS |
NC_009952 |
434981 |
435769 |
- |
789 |
transcriptional regulator |
YP_001531796 |
decreased coverage |
0.00494896 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0786 |
CDS |
NC_009952 |
791654 |
792166 |
+ |
513 |
transcriptional regulator |
YP_001532132 |
decreased coverage |
0.000100342 |
normal |
0.0526342 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0852 |
CDS |
NC_009952 |
863045 |
864853 |
+ |
1809 |
lipid A ABC exporter family |
YP_001532198 |
decreased coverage |
0.00564413 |
normal |
0.170216 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_0998 |
CDS |
NC_009952 |
1030013 |
1031707 |
- |
1695 |
adenine deaminase |
YP_001532341 |
decreased coverage |
0.00442285 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1018 |
CDS |
NC_009952 |
1053428 |
1053700 |
+ |
273 |
hypothetical protein |
YP_001532361 |
decreased coverage |
0.00231491 |
normal |
0.683012 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1043 |
CDS |
NC_009952 |
1076851 |
1077846 |
- |
996 |
TRAP dicarboxylate transporter- DctP subunit |
YP_001532386 |
decreased coverage |
0.000669152 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1110 |
CDS |
NC_009952 |
1134607 |
1135662 |
+ |
1056 |
hypothetical protein |
YP_001532453 |
decreased coverage |
0.00592448 |
normal |
0.281955 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1111 |
CDS |
NC_009952 |
1135659 |
1136999 |
+ |
1341 |
translocation protein TolB |
YP_001532454 |
decreased coverage |
0.00131159 |
normal |
0.386204 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1166 |
CDS |
NC_009952 |
1195258 |
1196730 |
+ |
1473 |
GTP-binding protein EngA |
YP_001532509 |
decreased coverage |
0.000230797 |
normal |
0.345653 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1179 |
CDS |
NC_009952 |
1210889 |
1214206 |
+ |
3318 |
hypothetical protein |
YP_001532522 |
decreased coverage |
0.00453923 |
normal |
0.431932 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1311 |
CDS |
NC_009952 |
1363417 |
1364631 |
+ |
1215 |
NADH dehydrogenase subunit D |
YP_001532654 |
decreased coverage |
0.00990981 |
normal |
0.0474356 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1319 |
CDS |
NC_009952 |
1369561 |
1370079 |
+ |
519 |
hypothetical protein |
YP_001532662 |
normal |
0.314854 |
decreased coverage |
0.00847169 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1393 |
CDS |
NC_009952 |
1445608 |
1446195 |
- |
588 |
hypothetical protein |
YP_001532736 |
decreased coverage |
0.00750725 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1562 |
CDS |
NC_009952 |
1626290 |
1626820 |
- |
531 |
hypothetical protein |
YP_001532905 |
decreased coverage |
0.000177224 |
normal |
0.0964929 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1643 |
CDS |
NC_009952 |
1704693 |
1705760 |
- |
1068 |
recombinase A |
YP_001532986 |
normal |
0.883064 |
decreased coverage |
0.00000000000602005 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1644 |
CDS |
NC_009952 |
1705935 |
1708274 |
- |
2340 |
histidine kinase |
YP_001532987 |
normal |
1 |
decreased coverage |
0.0000000000228151 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1687 |
CDS |
NC_009952 |
1756672 |
1757268 |
- |
597 |
putative HNH endonuclease |
YP_001533030 |
decreased coverage |
0.00321972 |
normal |
0.0401015 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1688 |
CDS |
NC_009952 |
1757458 |
1758129 |
- |
672 |
putative phospholipase / carboxylesterase |
YP_001533031 |
decreased coverage |
0.00377416 |
normal |
0.0415953 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1701 |
CDS |
NC_009952 |
1770402 |
1771202 |
- |
801 |
putative high-affinity zinc uptake system membrane protein |
YP_001533044 |
decreased coverage |
0.000503505 |
normal |
0.0364016 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1702 |
CDS |
NC_009952 |
1771199 |
1771942 |
- |
744 |
zinc import ATP-binding protein |
YP_001533045 |
decreased coverage |
0.00101285 |
normal |
0.0355653 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1797 |
CDS |
NC_009952 |
1868767 |
1870593 |
- |
1827 |
hypothetical protein |
YP_001533140 |
decreased coverage |
0.0000479521 |
normal |
0.132264 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1820 |
CDS |
NC_009952 |
1898151 |
1898933 |
+ |
783 |
mannosyl-3-phosphoglycerate phosphatase |
YP_001533163 |
decreased coverage |
0.00552439 |
normal |
0.470118 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1888 |
CDS |
NC_009952 |
1965637 |
1966230 |
- |
594 |
phosphoribosylglycinamide formyltransferase |
YP_001533231 |
decreased coverage |
0.00391405 |
normal |
0.23878 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1950 |
CDS |
NC_009952 |
2041261 |
2041860 |
+ |
600 |
hypothetical protein |
YP_001533292 |
decreased coverage |
0.000104979 |
hitchhiker |
0.0000770868 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1956 |
CDS |
NC_009952 |
2049974 |
2050936 |
- |
963 |
putative NAD-dependent epimerase/dehydratase |
YP_001533298 |
decreased coverage |
0.000864089 |
hitchhiker |
0.00126231 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1957 |
CDS |
NC_009952 |
2051005 |
2052432 |
- |
1428 |
hypothetical protein |
YP_001533299 |
decreased coverage |
0.00211883 |
hitchhiker |
0.00150316 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_1995 |
CDS |
NC_009952 |
2113662 |
2114381 |
+ |
720 |
hypothetical protein |
YP_001533335 |
decreased coverage |
0.00112898 |
normal |
0.836416 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2012 |
CDS |
NC_009952 |
2131292 |
2132107 |
+ |
816 |
putative ABC transporter inner membrane component |
YP_001533352 |
normal |
0.100736 |
decreased coverage |
0.00339933 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2208 |
CDS |
NC_009952 |
2333780 |
2335267 |
- |
1488 |
putative D-alanyl-D-alanine carboxypeptidase/endopeptidase |
YP_001533545 |
decreased coverage |
0.00369508 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2416 |
CDS |
NC_009952 |
2555094 |
2556689 |
- |
1596 |
cell division protein FtsZ |
YP_001533751 |
decreased coverage |
0.0000000147556 |
normal |
0.595095 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2565 |
CDS |
NC_009952 |
2730319 |
2730960 |
- |
642 |
response regulator protein |
YP_001533899 |
decreased coverage |
0.0000000000140338 |
decreased coverage |
0.00000000000000164026 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2674 |
CDS |
NC_009952 |
2830905 |
2831591 |
+ |
687 |
two component transcriptional regulator |
YP_001534008 |
decreased coverage |
0.00219271 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2758 |
CDS |
NC_009952 |
2919558 |
2920268 |
+ |
711 |
transcriptional regulator |
YP_001534092 |
normal |
1 |
decreased coverage |
0.00797611 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2840 |
CDS |
NC_009952 |
2997915 |
2998571 |
+ |
657 |
peptidase M22 |
YP_001534174 |
decreased coverage |
0.000908418 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2841 |
CDS |
NC_009952 |
2998568 |
2998987 |
+ |
420 |
putative ribosomal-protein-alanine acetyltransferase |
YP_001534175 |
decreased coverage |
0.000949861 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2890 |
CDS |
NC_009952 |
3046511 |
3046822 |
- |
312 |
hypothetical protein |
YP_001534224 |
decreased coverage |
0.000199627 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2891 |
CDS |
NC_009952 |
3046819 |
3047547 |
- |
729 |
3-ketoacyl-(acyl-carrier-protein) reductase |
YP_001534225 |
decreased coverage |
0.000353377 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_2949 |
CDS |
NC_009952 |
3109029 |
3111326 |
- |
2298 |
putative Vitamin B12-dependent ribonucleotide reductase |
YP_001534283 |
normal |
1 |
decreased coverage |
0.00955068 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_3081 |
CDS |
NC_009952 |
3248865 |
3252272 |
+ |
3408 |
efflux transporter |
YP_001534415 |
decreased coverage |
0.00863053 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |
| Dshi_3149 |
CDS |
NC_009952 |
3315173 |
3315985 |
- |
813 |
putative D-alanyl-d-alanine dipeptidase |
YP_001534483 |
decreased coverage |
0.00328956 |
normal |
1 |
Dinoroseobacter shibae DFL 12 |
Bacteria |
|
|
- |