8 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
BamMC406_5538  CDS  NC_010557  32895  33662  768  short-chain dehydrogenase/reductase SDR  YP_001815534  decreased coverage  0.00687705  normal  Burkholderia ambifaria MC40-6  Bacteria 
 
 
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BamMC406_5610  CDS  NC_010557  110433  111341  909  AraC family transcriptional regulator  YP_001815606  decreased coverage  0.00190409  normal  0.169642  Burkholderia ambifaria MC40-6  Bacteria 
 
 
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BamMC406_5668  CDS  NC_010557  175595  177769  2175  hypothetical protein  YP_001815664  normal  decreased coverage  0.00822917  Burkholderia ambifaria MC40-6  Bacteria 
 
 
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BamMC406_5678  CDS  NC_010557  187938  189164  1227  Rieske (2Fe-2S) domain-containing protein  YP_001815674  decreased coverage  0.0000120872  normal  0.0293014  Burkholderia ambifaria MC40-6  Bacteria 
 
 
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BamMC406_5679  CDS  NC_010557  189438  189998  561  Rossmann fold nucleotide-binding protein-like protein  YP_001815675  decreased coverage  0.000000903991  normal  0.0372691  Burkholderia ambifaria MC40-6  Bacteria 
 
 
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BamMC406_6283  CDS  NC_010557  869887  871713  1827  thiamine pyrophosphate protein  YP_001816269  normal  0.368758  decreased coverage  0.00160036  Burkholderia ambifaria MC40-6  Bacteria 
 
 
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BamMC406_6284  CDS  NC_010557  871827  873605  1779  glycoside hydrolase 15-related  YP_001816270  normal  decreased coverage  0.00160036  Burkholderia ambifaria MC40-6  Bacteria 
 
 
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BamMC406_6407  CDS  NC_010557  1014184  1014516  333  hypothetical protein  YP_001816390  decreased coverage  0.00903722  normal  0.080212  Burkholderia ambifaria MC40-6  Bacteria 
 
 
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