12 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Rleg_4754  CDS  NC_012848  122779  124641  1863  hypothetical protein  YP_002972944  decreased coverage  0.00204432  normal  0.330996  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_4755  CDS  NC_012848  124638  125672  1035  oxidoreductase domain protein  YP_002972945  decreased coverage  0.00177574  normal  0.507858  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_4856  CDS  NC_012848  234438  234932  495  transcriptional regulator, AsnC family  YP_002973046  decreased coverage  0.00513546  normal  0.170919  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_4857  CDS  NC_012848  235083  235289  207  hypothetical protein  YP_002973047  decreased coverage  0.00152988  normal  0.233929  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_4890    NC_012848  273181  273380  200      decreased coverage  0.00436313  normal  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_4956  CDS  NC_012848  336140  338425  2286  heavy metal translocating P-type ATPase  YP_002973133  decreased coverage  0.00130227  normal  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_5055  CDS  NC_012848  439431  440216  786  hypothetical protein  YP_002973230  decreased coverage  0.00118932  normal  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_5098  CDS  NC_012848  492008  495289  3282  trehalose synthase  YP_002973272  normal  0.436768  decreased coverage  0.00978496  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_5101  CDS  NC_012848  498297  499337  1041  transport system permease protein  YP_002973275  decreased coverage  0.00326561  normal  0.03131  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_5151  CDS  NC_012848  553128  554045  918  protein of unknown function DUF6 transmembrane  YP_002973321  decreased coverage  0.00128195  normal  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_5176  CDS  NC_012848  582358  583188  831  NAD-dependent epimerase/dehydratase  YP_002973346  decreased coverage  0.00756202  normal  0.114208  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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Rleg_5192    NC_012848  602187  603500  1314      decreased coverage  0.00359644  normal  0.111911  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
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