31 decreased-coverage genes were found for selected organism/s



Page 1 of 1    << first  < prev  1  next >  last >>   


Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Bphy_0316  CDS  NC_010622  357869  358750  -  882  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase  YP_001856555  decreased coverage  0.00626932  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0489  CDS  NC_010622  557071  557853  +  783  sorbitol dehydrogenase  YP_001856727  decreased coverage  0.0000937678  hitchhiker  0.00159634  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0494  CDS  NC_010622  562070  563179  +  1110  ABC transporter related  YP_001856732  normal  0.0952416  decreased coverage  0.000489409  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0564  CDS  NC_010622  638815  639384  -  570  pseudouridine synthase  YP_001856802  hitchhiker  0.00757651  decreased coverage  0.0000739028  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0565  CDS  NC_010622  639716  640972  +  1257  isocitrate dehydrogenase  YP_001856803  hitchhiker  0.000686773  decreased coverage  0.000103322  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0795  CDS  NC_010622  892538  893938  -  1401  fumarate hydratase  YP_001857030  decreased coverage  0.00749677  normal  0.0712325  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0807  CDS  NC_010622  905529  905852  -  324  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  YP_001857042  decreased coverage  0.000000000383112  normal  0.414836  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0818  CDS  NC_010622  916407  919685  -  3279  ribonuclease  YP_001857053  decreased coverage  0.00158382  normal  0.513461  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0851  CDS  NC_010622  949920  952142  +  2223  excinuclease ABC subunit C  YP_001857086  decreased coverage  0.00444649  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_0871  CDS  NC_010622  970823  972508  +  1686  lytic transglycosylase catalytic  YP_001857106  decreased coverage  0.000448288  normal  0.420997  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1012  CDS  NC_010622  1134547  1135818  +  1272  ATP-dependent protease ATP-binding subunit ClpX  YP_001857247  decreased coverage  0.00708738  normal  0.963752  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1326  CDS  NC_010622  1484972  1485760  -  789  UDP-N-acetylglucosamine acyltransferase  YP_001857554  decreased coverage  0.000759868  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1406  CDS  NC_010622  1582366  1584708  +  2343  RNA-binding S1 domain-containing protein  YP_001857634  normal  0.252881  decreased coverage  0.0000000874326  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1407  CDS  NC_010622  1584877  1586763  -  1887  K potassium transporter  YP_001857635  normal  0.196511  decreased coverage  0.0000000731332  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1466  CDS  NC_010622  1646785  1647948  -  1164  peptidase S11 D-alanyl-D-alanine carboxypeptidase 1  YP_001857694  decreased coverage  0.00347318  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1489  CDS  NC_010622  1684811  1686190  +  1380  N-acetylglutamate synthase  YP_001857717  decreased coverage  0.00249644  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1702  CDS  NC_010622  1942095  1943012  +  918  dehydratase  YP_001857930  decreased coverage  0.00665806  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1906  CDS  NC_010622  2155899  2156918  -  1020  GP60  YP_001858131  decreased coverage  0.000000738533  normal  0.0210495  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1907  CDS  NC_010622  2156915  2157226  -  312  hypothetical protein  YP_001858132  decreased coverage  0.0000000433539  normal  0.0286753  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_1995  CDS  NC_010622  2245007  2245303  -  297  hypothetical protein  YP_001858220  decreased coverage  0.0084371  normal  0.265781  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2163  CDS  NC_010622  2425126  2425902  +  777  cationic amino acid ABC transporter, periplasmic binding protein  YP_001858384  normal  0.0442479  decreased coverage  0.0000000159985  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2166  CDS  NC_010622  2427660  2428445  +  786  ABC transporter related  YP_001858387  decreased coverage  0.0000000402922  hitchhiker  0.000000271628  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2190  CDS  NC_010622  2458493  2459146  +  654  OmpA/MotB domain-containing protein  YP_001858411  decreased coverage  0.000129773  normal  0.4125  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2206  CDS  NC_010622  2480314  2481315  +  1002  putative threonine-phosphate decarboxylase  YP_001858427  decreased coverage  0.00487781  normal  0.816406  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2207  CDS  NC_010622  2481321  2482232  +  912  periplasmic binding protein  YP_001858428  decreased coverage  0.00190614  normal  0.612299  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2653  CDS  NC_010622  2993037  2994029  +  993  polyprenyl synthetase  YP_001858871  decreased coverage  0.00415418  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2688  CDS  NC_010622  3040821  3041597  -  777  enoyl-CoA hydratase  YP_001858906  decreased coverage  0.00000000387614  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2839  CDS  NC_010622  3179622  3180242  -  621  50S ribosomal protein L4  YP_001859057  decreased coverage  0.0000000169968  normal  0.198819  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2981  CDS  NC_010622  3339704  3340006  -  303  histone family protein nucleoid-structuring protein H-NS  YP_001859197  normal  0.207499  decreased coverage  0.0000000417224  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_2982  CDS  NC_010622  3340296  3341045  +  750  aquaporin Z  YP_001859198  normal  0.727537  decreased coverage  0.0000000621179  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Bphy_R0012  rRNA  NC_010622  3038846  3040369  -  1524  16S ribosomal RNA    decreased coverage  0.0000010553  normal  1  Burkholderia phymatum STM815  Bacteria 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>