39 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
PSPA7_0587  CDS  NC_009656  607672  608187  516  hypothetical protein  YP_001345982  decreased coverage  0.000555119  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_0588  CDS  NC_009656  608876  609772  897  hypothetical protein  YP_001345983  decreased coverage  0.0009394  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_0677  CDS  NC_009656  686460  687581  1122  hypothetical protein  YP_001346072  decreased coverage  0.00227082  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_0743  CDS  NC_009656  746545  747594  1050  hypothetical protein  YP_001346138  decreased coverage  0.00643704  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_0824  CDS  NC_009656  816679  817047  369  preprotein translocase subunit SecE  YP_001346210  decreased coverage  0.00674699  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_0825  CDS  NC_009656  817057  817590  534  transcription antitermination protein NusG  YP_001346211  decreased coverage  0.00247224  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_0982  CDS  NC_009656  986318  986440  123  hypothetical protein  YP_001346368  decreased coverage  0.000342269  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_0983  CDS  NC_009656  986876  987274  399  hypothetical protein  YP_001346369  decreased coverage  0.000834887  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_0984  CDS  NC_009656  987337  988530  1194  beta-lactamase  YP_001346370  decreased coverage  0.00291811  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_1406  CDS  NC_009656  1423679  1424482  804  hypothetical protein  YP_001346790  decreased coverage  0.00692246  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_1409  CDS  NC_009656  1426136  1427014  879  general secretion pathway protein K  YP_001346793  decreased coverage  0.0046886  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_1676  CDS  NC_009656  1721762  1721971  210  hypothetical protein  YP_001347060  decreased coverage  0.00620907  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_1826  CDS  NC_009656  1863209  1863418  210  hypothetical protein  YP_001347209  decreased coverage  0.00476342  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_1949  CDS  NC_009656  1979449  1980111  663  keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase  YP_001347330  decreased coverage  0.00379158  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_1950  CDS  NC_009656  1980202  1980639  438  hypothetical protein  YP_001347331  decreased coverage  0.00937035  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_1952  CDS  NC_009656  1982205  1983125  921  hypothetical protein  YP_001347333  decreased coverage  0.00612967  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_1953  CDS  NC_009656  1983355  1984569  1215  sodium/glutamate symporter  YP_001347334  decreased coverage  0.00992782  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_2017  CDS  NC_009656  2054446  2055456  1011  aspartate-semialdehyde dehydrogenase  YP_001347393  decreased coverage  0.00533775  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_2286  CDS  NC_009656  2342674  2343033  360  hypothetical protein  YP_001347658  decreased coverage  0.00837835  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_2451  CDS  NC_009656  2483238  2483579  342  hypothetical protein  YP_001347818  decreased coverage  0.00923047  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_2538  CDS  NC_009656  2555959  2556225  267  hypothetical protein  YP_001347902  decreased coverage  0.00251361  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_2539  CDS  NC_009656  2556209  2557102  894  hypothetical protein  YP_001347903  decreased coverage  0.00846022  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_2676  CDS  NC_009656  2688674  2688820  147  hypothetical protein  YP_001348036  decreased coverage  0.00630461  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_4123  CDS  NC_009656  4258954  4260069  1116  hypothetical protein  YP_001349477  decreased coverage  0.00603105  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_4124  CDS  NC_009656  4260066  4260302  237  hypothetical protein  YP_001349478  decreased coverage  0.00126127  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_4126  CDS  NC_009656  4260299  4261552  1254  putative oxidoreductase  YP_001349479  decreased coverage  0.00762478  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_4179  CDS  NC_009656  4317749  4318342  594  putative lipoprotein  YP_001349533  decreased coverage  0.000450162  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_4180  CDS  NC_009656  4318365  4318946  582  hypothetical protein  YP_001349534  decreased coverage  0.000520752  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_4335  CDS  NC_009656  4471047  4471511  465  hypothetical protein  YP_001349688  decreased coverage  0.000550013  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_4979  CDS  NC_009656  5134274  5135458  1185  cell division protein FtsZ  YP_001350315  decreased coverage  0.0056047  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_5003  CDS  NC_009656  5159240  5159833  594  ubiquinol-cytochrome c reductase iron-sulfur subunit  YP_001350339  decreased coverage  0.000329948  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_5145  CDS  NC_009656  5297450  5297698  249  hypothetical protein  YP_001350481  decreased coverage  0.00434752  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_5371  CDS  NC_009656  5535279  5535530  252  hypothetical protein  YP_001350701  decreased coverage  0.000318017  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_5372  CDS  NC_009656  5535543  5535635  93  hypothetical protein  YP_001350702  decreased coverage  0.000216481  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_5403  rRNA  NC_009656  5569892  5571388  1497  16S ribosomal RNA    decreased coverage  0.00231209  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_5404  CDS  NC_009656  5571345  5571464  120  hypothetical protein  YP_001350728  decreased coverage  0.000134106  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_5405  CDS  NC_009656  5571923  5572531  609  putative sulfite oxidase subunit YedZ  YP_001350729  decreased coverage  0.000422171  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
-
 
PSPA7_5848  CDS  NC_009656  6044483  6045067  585  hypothetical protein  YP_001351167  decreased coverage  0.00432181  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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PSPA7_5849  CDS  NC_009656  6045151  6045576  426  putative transcriptional regulator  YP_001351168  decreased coverage  0.00369897  n/a    Pseudomonas aeruginosa PA7  Bacteria 
 
 
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