26 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
RSP_0119  CDS  NC_007493  1834149  1834919  -  771  PA-phosphatase related phosphoesterase  YP_353194  decreased coverage  0.00406131  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_0202  CDS  NC_007493  1917787  1918257  +  471  hypothetical protein  YP_353274  decreased coverage  0.00696457  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_0672  CDS  NC_007493  2413285  2413983  -  699  biopolymer transport protein, TolQ  YP_353747  decreased coverage  0.00353274  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_1582  CDS  NC_007493  174090  174365  +  276  putative sulfate transporter/antisigma-factor antagonist  YP_351626  decreased coverage  0.000914611  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_1661  CDS  NC_007493  253514  253789  +  276  hypothetical protein  YP_351709  decreased coverage  0.0055577  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_1730  CDS  NC_007493  315217  315750  +  534  50S ribosomal protein L6  YP_351778  decreased coverage  0.00717993  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_1731  CDS  NC_007493  315762  316121  +  360  50S ribosomal protein L18  YP_351779  decreased coverage  0.00463126  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_1912  CDS  NC_007493  510817  511056  -  240  hypothetical protein  YP_351962  decreased coverage  0.00117595  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_1935  CDS  NC_007493  535062  535592  +  531  sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis  YP_351987  decreased coverage  0.000282048  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_2100  CDS  NC_007493  700157  701590  +  1434  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase  YP_352156  decreased coverage  0.00461535  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_2356  CDS  NC_007493  981816  983288  +  1473  hypothetical protein  YP_352415  decreased coverage  0.00712724  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_2384  CDS  NC_007493  1013866  1014426  +  561  hypothetical protein  YP_352446  decreased coverage  0.00852398  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_2726  CDS  NC_007493  1376415  1377635  -  1221  major facilitator superfamily multidrug transporter  YP_352782  decreased coverage  0.00306435  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_2773  CDS  NC_007493  1420507  1421145  -  639  hypothetical protein  YP_352831  decreased coverage  0.0089778  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_2985  CDS  NC_007493  1676110  1676679  -  570  hypothetical protein  YP_353047  decreased coverage  0.00785423  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_3064  CDS  NC_007494  104527  105309  +  783  DeoR family transcriptional regulator  YP_354582  decreased coverage  0.00624963  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_3110  CDS  NC_007494  155515  156171  +  657  putative glutathione S-transferase  YP_354626  decreased coverage  0.000803235  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_3157  CDS  NC_007494  207597  208721  -  1125  ABC transporter, inner membrane subunit  YP_354675  decreased coverage  0.00527406  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_3197  CDS  NC_007494  250706  251440  +  735  electron transport complex RsxE subunit  YP_354714  decreased coverage  0.0099576  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_3771  CDS  NC_007494  915658  916362  +  705  hypothetical protein  YP_355300  decreased coverage  0.00553351  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_3772  CDS  NC_007494  915031  915372  -  342  hypothetical protein  YP_355299  decreased coverage  0.00696457  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_3799  CDS  NC_007494  916913  917245  +  333  hypothetical protein  YP_355302  decreased coverage  0.0076212  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_4325  tRNA  NC_007493  1810  1885  +  76  tRNA-Ala    decreased coverage  0.00976587  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_6203  CDS  NC_007494  916719  916916  +  198  hypothetical protein  YP_355301  decreased coverage  0.00564434  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_6244  CDS  NC_007493  1690255  1690626  -  372  hypothetical protein  YP_353058  decreased coverage  0.000309102  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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RSP_6245  CDS  NC_007493  1690672  1691094  -  423  hypothetical protein  YP_353059  decreased coverage  0.000335649  n/a    Rhodobacter sphaeroides 2.4.1  Bacteria 
 
 
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