38 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Mfl080  CDS  NC_006055  102862  103734  +  873  30S ribosomal protein S6  YP_053320  decreased coverage  1.25992e-19  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl122  CDS  NC_006055  146917  147225  +  309  30S ribosomal protein S10  YP_053362  decreased coverage  5.36997e-55  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl145  CDS  NC_006055  158856  159614  +  759  methionine aminopeptidase  YP_053385  decreased coverage  0.000000000374486  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl160  CDS  NC_006055  181534  183534  +  2001  DNA ligase, polydeoxyribonucleotide synthase NAD+  YP_053400  decreased coverage  0.0025564  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl188  CDS  NC_006055  217758  218300  +  543  translation initiation factor IF-3  YP_053429  decreased coverage  6.75747e-16  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl209  CDS  NC_006055  234224  236338  +  2115  virulence associated protein, ribonuclease R  YP_053450  decreased coverage  0.000726605  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl221  CDS  NC_006055  247142  248302  +  1161  serine/threonine protein kinase  YP_053462  decreased coverage  0.0000000375165  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl248  CDS  NC_006055  278264  279490  +  1227  selenocysteine lyase, class V pyridoxal phosphate aminotransferase, cysteine desulfurase  YP_053489  decreased coverage  0.00113755  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl256  CDS  NC_006055  284962  285927  +  966  unknown transmembrane protein  YP_053497  decreased coverage  0.00000000118519  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl261  CDS  NC_006055  291458  296539  +  5082  unknown substrate ABC transporter permease component  YP_053502  decreased coverage  0.0000900021  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl262  CDS  NC_006055  296634  301808  +  5175  unknown substrate ABC transporter permease component  YP_053503  decreased coverage  0.00148086  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl264  CDS  NC_006055  302391  304217  +  1827  putative multidrug ABC transporter  YP_053505  decreased coverage  4.04334e-22  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl275  CDS  NC_006055  315752  319762  +  4011  protein-export membrane protein  YP_053516  decreased coverage  0.00136953  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl283  CDS  NC_006055  325711  326280  +  570  riboflavin kinase/FAD synthase  YP_053524  decreased coverage  0.00000902633  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl299  CDS  NC_006055  344834  345490  +  657  heat shock protein chaperone  YP_053540  decreased coverage  6.65204e-51  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl300  CDS  NC_006055  345490  346398  +  909  unknown transmembrane protein  YP_053541  decreased coverage  7.52765e-46  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl314  CDS  NC_006055  365694  368411  +  2718  DNA repair DNA/RNA helicase  YP_053555  decreased coverage  4.84028e-18  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl320  CDS  NC_006055  375817  376365  +  549  hypothetical protein  YP_053561  decreased coverage  1.11089e-23  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl326  CDS  NC_006055  383484  384404  -  921  unknown transmembrane protein  YP_053567  decreased coverage  1.28827e-37  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl360  CDS  NC_006055  420175  420846  -  672  hypothetical protein  YP_053601  decreased coverage  1.76839e-22  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl361  CDS  NC_006055  420925  421635  +  711  hypothetical protein  YP_053602  decreased coverage  6.2181e-23  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl368.1  CDS  NC_006055  429523  429768  +  246  30S ribosomal protein S20  YP_053611  decreased coverage  4.5112799999999996e-45  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl394  CDS  NC_006055  454506  455432  -  927  S-adenosyl-methyltransferase MraW  YP_053637  decreased coverage  0.0000973738  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl423  CDS  NC_006055  495401  497245  -  1845  multidrug ABC transporter  YP_053666  decreased coverage  0.00524673  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl429  CDS  NC_006055  503732  507511  -  3780  hypothetical protein  YP_053672  decreased coverage  0.000645929  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl434  CDS  NC_006055  512060  512758  +  699  unknown transmembrane protein  YP_053677  decreased coverage  2.98855e-34  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl448  CDS  NC_006055  529927  530652  -  726  unknown transmembrane protein  YP_053690  decreased coverage  1.68912e-41  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl454  CDS  NC_006055  535709  536476  -  768  unknown lipoprotein  YP_053696  decreased coverage  8.38767e-33  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl460  CDS  NC_006055  541996  543810  -  1815  unknown lipoprotein  YP_053702  decreased coverage  0.0000000000176567  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl469  CDS  NC_006055  553412  555250  +  1839  GTP-binding membrane protein, elongation factor  YP_053711  decreased coverage  0.0000135836  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl538  CDS  NC_006055  634350  635297  -  948  GTPase  YP_053780  decreased coverage  0.000000000607031  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl539  CDS  NC_006055  635387  635773  -  387  50S ribosomal protein L19  YP_053781  decreased coverage  0.00000000175724  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl551  CDS  NC_006055  643489  644328  -  840  hypothetical protein  YP_053793  decreased coverage  0.0000000389415  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl552  CDS  NC_006055  644345  644914  -  570  hypothetical protein  YP_053794  decreased coverage  0.0000000000175256  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mfl565  CDS  NC_006055  657113  657382  -  270  phosphotransferase system phosphohistidine-containing protein  YP_053807  decreased coverage  0.0000217901  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mflt021  tRNA  NC_006055  596165  596241  -  77  tRNA-Met    decreased coverage  0.000111165  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mflt022  tRNA  NC_006055  596250  596326  -  77  tRNA-Met    decreased coverage  0.000116471  n/a    Mesoplasma florum L1  Bacteria 
 
 
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Mflt07  tRNA  NC_006055  191498  191581  +  84  tRNA-Leu    decreased coverage  0.0000815997  n/a    Mesoplasma florum L1  Bacteria 
 
 
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