4717 genes were found for organism Pectobacterium wasabiae WPP163



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Pecwa_0001  CDS  NC_013421  53  1450  +  1398  chromosomal replication initiation protein  YP_003257477  hitchhiker  0.00429077  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0002  CDS  NC_013421  1455  2555  +  1101  DNA polymerase III subunit beta  YP_003257478  unclonable  0.00000790466  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0003  CDS  NC_013421  2603  3688  +  1086  recombination protein F  YP_003257479  normal  0.0110624  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0004  CDS  NC_013421  3707  6124  +  2418  DNA gyrase subunit B  YP_003257480  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0005  CDS  NC_013421  6241  7431  -  1191  major facilitator superfamily MFS_1  YP_003257481  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0006  CDS  NC_013421  7658  9661  -  2004  methyl-accepting chemotaxis sensory transducer with Cache sensor  YP_003257482  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0007  CDS  NC_013421  9975  10988  -  1014  transcriptional regulator, LacI family  YP_003257483  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0008  CDS  NC_013421  11202  11507  +  306  phosphotransferase system lactose/cellobiose-specific IIB subunit  YP_003257484  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0009  CDS  NC_013421  11524  12837  +  1314  PTS system, lactose/cellobiose family IIC subunit  YP_003257485  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0010  CDS  NC_013421  12827  13159  +  333  phosphotransferase system PTS lactose/cellobiose-specific IIA subunit  YP_003257486  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0011  CDS  NC_013421  13175  14617  +  1443  glycoside hydrolase family 1  YP_003257487  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0012  CDS  NC_013421  14773  15588  +  816  sugar phosphatase  YP_003257488  normal  0.758679  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0013  CDS  NC_013421  15973  16866  +  894  lipoprotein  YP_003257489  normal  0.180865  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0014  CDS  NC_013421  17108  18004  -  897  transcriptional regulator, LysR family  YP_003257490  normal  0.12063  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0015  CDS  NC_013421  18147  19697  +  1551  extracellular solute-binding protein family 5  YP_003257491  normal  0.406265  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0016  CDS  NC_013421  19766  20650  +  885  dihydrodipicolinate synthetase  YP_003257492  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0017  CDS  NC_013421  20754  21707  +  954  Ribosylpyrimidine nucleosidase  YP_003257493  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0018  CDS  NC_013421  21712  22680  +  969  Inosine/uridine-preferring nucleoside hydrolase  YP_003257494  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0019  CDS  NC_013421  22680  23657  +  978  binding-protein-dependent transport systems inner membrane component  YP_003257495  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0020  CDS  NC_013421  23654  24562  +  909  binding-protein-dependent transport systems inner membrane component  YP_003257496  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0021  CDS  NC_013421  24602  26407  +  1806  ABC transporter related protein  YP_003257497  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0022  CDS  NC_013421  26772  27470  +  699  GntR domain protein  YP_003257498  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0023  CDS  NC_013421  27467  28363  +  897  2-dehydro-3-deoxygalactonokinase  YP_003257499  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0024  CDS  NC_013421  28347  28964  +  618  2-dehydro-3-deoxy-6-phosphogalactonate aldolase  YP_003257500  normal  0.981922  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0025  CDS  NC_013421  28961  30109  +  1149  galactonate dehydratase  YP_003257501  normal  0.192366  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0026  CDS  NC_013421  30193  30309  +  117  hypothetical protein  YP_003257502  normal  0.072688  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0027  CDS  NC_013421  30654  31943  +  1290  d-galactonate transporter  YP_003257503  normal  0.104375  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0028  CDS  NC_013421  32052  32309  -  258  protein of unknown function DUF1471  YP_003257504  normal  0.20234  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0029  CDS  NC_013421  32482  33282  -  801  aliphatic sulfonates transport ATP-binding subunit  YP_003257505  normal  0.05113  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0030  CDS  NC_013421  33279  34073  -  795  binding-protein-dependent transport systems inner membrane component  YP_003257506  normal  0.050552  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0031  CDS  NC_013421  34084  35226  -  1143  alkanesulfonate monooxygenase  YP_003257507  normal  0.448896  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0032  CDS  NC_013421  35285  36307  -  1023  alkanesulfonate transporter substrate-binding subunit  YP_003257508  normal  0.420208  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0033  CDS  NC_013421  36706  37029  +  324  phosphotransferase system lactose/cellobiose-specific IIB subunit  YP_003257509  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0034  CDS  NC_013421  37026  38342  +  1317  PTS system, lactose/cellobiose family IIC subunit  YP_003257510  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0035  CDS  NC_013421  38368  39765  +  1398  Beta-glucosidase  YP_003257511  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0036  CDS  NC_013421  40035  40292  -  258  protein of unknown function DUF1471  YP_003257512  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0037  CDS  NC_013421  40529  41815  +  1287  hypothetical protein  YP_003257513  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0038  CDS  NC_013421  41862  42236  -  375  hypothetical protein  YP_003257514  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0039  CDS  NC_013421  42625  43038  +  414  heat shock protein IbpA  YP_003257515  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0040  CDS  NC_013421  43181  43633  +  453  heat shock chaperone IbpB  YP_003257516  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0041  CDS  NC_013421  43747  44361  -  615  hypothetical protein  YP_003257517  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0042  CDS  NC_013421  44599  46257  +  1659  hypothetical protein  YP_003257518  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0043  CDS  NC_013421  46783  48195  +  1413  anion transporter  YP_003257519  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0044  CDS  NC_013421  48388  50016  +  1629  sensory histidine kinase DcuS  YP_003257520  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0045  CDS  NC_013421  50009  50731  +  723  DNA-binding transcriptional activator DcuR  YP_003257521  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0046    NC_013421  50849  51742  +  894      normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0047  CDS  NC_013421  51729  52007  +  279  hypothetical protein  YP_003257522  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0048  CDS  NC_013421  52146  53489  -  1344  Citrate carrier protein  YP_003257523  normal  0.844506  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0049  CDS  NC_013421  55087  56694  +  1608  extracellular solute-binding protein family 5  YP_003257524  normal  0.46848  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0050  CDS  NC_013421  56929  57948  +  1020  dipeptide transporter permease DppB  YP_003257525  normal  0.969756  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0051  CDS  NC_013421  57961  58863  +  903  dipeptide transporter  YP_003257526  normal  0.644242  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0052  CDS  NC_013421  58877  59857  +  981  dipeptide transporter ATP-binding subunit  YP_003257527  normal  0.617772  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0053  CDS  NC_013421  59854  60864  +  1011  dipeptide transporter ATP-binding subunit  YP_003257528  normal  0.146375  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0054  CDS  NC_013421  60930  61535  -  606  hypothetical protein  YP_003257529  normal  0.17511  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0055  CDS  NC_013421  61721  62158  -  438  hypothetical protein  YP_003257530  normal  0.376359  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0056  CDS  NC_013421  62305  62796  -  492  hypothetical protein  YP_003257531  normal  0.837509  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0057  CDS  NC_013421  62790  63497  -  708  hypothetical protein  YP_003257532  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0058  CDS  NC_013421  63668  63937  -  270  hypothetical protein  YP_003257533  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0059  CDS  NC_013421  64055  64594  -  540  hypothetical protein  YP_003257534  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0060  CDS  NC_013421  64650  65021  -  372  hypothetical protein  YP_003257535  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0061  CDS  NC_013421  65245  65763  -  519  type VI secretion system effector, Hcp1 family  YP_003257536  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0062  CDS  NC_013421  66115  67368  -  1254  valine--pyruvate transaminase  YP_003257537  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0063  CDS  NC_013421  67761  68969  +  1209  hypothetical protein  YP_003257538  normal  0.833866  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0064  CDS  NC_013421  69077  70522  -  1446  altronate oxidoreductase  YP_003257539  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0065  CDS  NC_013421  70536  71558  -  1023  Alcohol dehydrogenase GroES domain protein  YP_003257540  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0066  CDS  NC_013421  71699  72613  +  915  transcriptional regulator, GntR family  YP_003257541  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0067  CDS  NC_013421  72827  74176  +  1350  major facilitator superfamily MFS_1  YP_003257542  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0068  CDS  NC_013421  74443  76236  +  1794  gamma-glutamyltransferase  YP_003257543  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0069  CDS  NC_013421  76340  77365  -  1026  hypothetical protein  YP_003257544  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0070  CDS  NC_013421  77712  81191  -  3480  cellulose synthase subunit BcsC  YP_003257545  normal  0.494386  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0071  CDS  NC_013421  81173  82288  -  1116  endo-1,4-D-glucanase  YP_003257546  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0072  CDS  NC_013421  82295  84652  -  2358  cellulose synthase regulator protein  YP_003257547  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0073  CDS  NC_013421  84727  87426  -  2700  cellulose synthase catalytic subunit  YP_003257548  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0074  CDS  NC_013421  87423  88160  -  738  cellulose synthase operon protein YhjQ  YP_003257549  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0075  CDS  NC_013421  88163  88372  -  210  hypothetical protein  YP_003257550  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0076  CDS  NC_013421  89087  90661  +  1575  cellulose biosynthesis protein BcsE  YP_003257551  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0077  CDS  NC_013421  90658  90864  +  207  celllulose biosynthesis operon protein BcsF/YhjT  YP_003257552  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0078  CDS  NC_013421  90866  92524  +  1659  cellulose synthase operon protein YhjU  YP_003257553  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0079  CDS  NC_013421  92959  94140  +  1182  diguanylate cyclase  YP_003257554  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0080  CDS  NC_013421  94459  95751  +  1293  C4-dicarboxylate transporter DctA  YP_003257555  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0081  CDS  NC_013421  96108  97610  +  1503  peptidase M16 domain protein  YP_003257556  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0082  CDS  NC_013421  97678  98610  -  933  PfkB domain protein  YP_003257557  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0083  CDS  NC_013421  98777  99793  -  1017  ribonuclease  YP_003257558  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0084  CDS  NC_013421  99923  101125  +  1203  major facilitator superfamily transporter  YP_003257559  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0085  CDS  NC_013421  101161  101727  -  567  hypothetical protein  YP_003257560  normal  0.283637  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0086  CDS  NC_013421  101914  102591  -  678  hypothetical protein  YP_003257561  normal  0.106131  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0087  CDS  NC_013421  102808  103053  +  246  sulfur transfer protein SirA  YP_003257562  normal  0.253958  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0088  CDS  NC_013421  103113  105467  -  2355  zinc/cadmium/mercury/lead-transporting ATPase  YP_003257563  normal  0.473574  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0089  CDS  NC_013421  105562  106191  -  630  YhhN family protein  YP_003257564  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0090  CDS  NC_013421  106373  106693  +  321  hypothetical protein  YP_003257565  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0091  CDS  NC_013421  106776  107054  -  279  hypothetical protein  YP_003257566  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0092  CDS  NC_013421  107081  107656  -  576  16S rRNA m(2)G966-methyltransferase  YP_003257567  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0093  CDS  NC_013421  107995  109410  +  1416  cell division protein FtsY  YP_003257568  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0094  CDS  NC_013421  109416  110087  +  672  cell division protein FtsE  YP_003257569  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0095  CDS  NC_013421  110077  111045  +  969  cell division protein FtsX  YP_003257570  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0096  CDS  NC_013421  111367  112224  +  858  RNA polymerase factor sigma-32  YP_003257571  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0097  CDS  NC_013421  112313  112759  -  447  GCN5-related N-acetyltransferase  YP_003257572  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0098  CDS  NC_013421  113165  114277  +  1113  Extracellular ligand-binding receptor  YP_003257573  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0099  CDS  NC_013421  114435  115361  +  927  branched-chain amino acid transporter permease subunit LivH  YP_003257574  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
Pecwa_0100  CDS  NC_013421  115358  116632  +  1275  leucine/isoleucine/valine transporter permease subunit  YP_003257575  normal  1  n/a    Pectobacterium wasabiae WPP163  Bacteria 
 
 
-
 
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