5854 genes were found for organism Methylobacterium chloromethanicum CM4



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Mchl_0001  CDS  NC_011757  359  625  267  30S ribosomal protein S20  YP_002418899  normal  normal  0.714217  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0002  CDS  NC_011757  1438  2943  1506  chromosomal replication initiation protein  YP_002418900  normal  normal  0.536334  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0003  CDS  NC_011757  3266  4387  1122  DNA polymerase III subunit beta  YP_002418901  normal  0.991791  normal  0.512948  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0004  CDS  NC_011757  4428  5585  1158  DNA replication and repair protein RecF  YP_002418902  normal  0.615543  normal  0.382944  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0005  CDS  NC_011757  5593  6204  612  Lysine exporter protein (LYSE/YGGA)  YP_002418903  normal  normal  0.325089  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0006  CDS  NC_011757  6208  6432  225  hypothetical protein  YP_002418904  normal  normal  0.301233  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0007  CDS  NC_011757  6543  8390  1848  ATP-dependent DNA helicase RecQ  YP_002418905  normal  normal  0.334789  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0008  CDS  NC_011757  8448  8786  339  hypothetical protein  YP_002418906  normal  0.22503  normal  0.471245  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0009  CDS  NC_011757  9102  9788  687  hypothetical protein  YP_002418907  normal  0.0279133  normal  0.188706  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0010  CDS  NC_011757  9896  12097  2202  helicase, RecD/TraA family  YP_002418908  normal  0.381195  normal  0.357387  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0011  CDS  NC_011757  12241  13425  1185  hypothetical protein  YP_002418909  normal  0.162736  normal  0.742614  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0012  CDS  NC_011757  13616  15841  2226  phosphoribosylformylglycinamidine synthase II  YP_002418910  normal  0.160482  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0013  CDS  NC_011757  15868  16104  237  BolA family protein  YP_002418911  normal  0.0874253  normal  0.885333  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0014  CDS  NC_011757  16178  16513  336  glutaredoxin-like protein  YP_002418912  normal  0.110732  normal  0.900956  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0015  CDS  NC_011757  16586  17488  903  FAD-dependent pyridine nucleotide-disulphide oxidoreductase  YP_002418913  normal  0.782253  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0016  CDS  NC_011757  17597  18481  885  SMP-30/Gluconolaconase/LRE domain protein  YP_002418914  normal  normal  0.726882  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0017  CDS  NC_011757  18667  18882  216  hypothetical protein  YP_002418915  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0018  CDS  NC_011757  18910  19746  837  hypothetical protein  YP_002418916  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0019  CDS  NC_011757  20115  22160  2046  PAS/PAC sensor hybrid histidine kinase  YP_002418917  normal  0.746553  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0020  CDS  NC_011757  22160  23722  1563  putative circadian clock protein, KaiC  YP_002418918  normal  0.624825  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0021  CDS  NC_011757  24073  25278  1206  hypothetical protein  YP_002418919  normal  0.170066  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0022  CDS  NC_011757  25309  26307  999  short-chain dehydrogenase/reductase SDR  YP_002418920  normal  0.939722  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0023  CDS  NC_011757  26430  27122  693  transcriptional regulator, GntR family  YP_002418921  normal  0.697058  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0024    NC_011757  27122  27412  291      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0025  CDS  NC_011757  27765  29411  1647  malonate decarboxylase, alpha subunit  YP_002418922  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0026  CDS  NC_011757  29419  29727  309  malonate decarboxylase subunit delta  YP_002418923  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0027  CDS  NC_011757  29730  30662  933  malonate decarboxylase subunit beta  YP_002418924  normal  0.960919  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0028  CDS  NC_011757  30649  31365  717  malonate decarboxylase, gamma subunit  YP_002418925  normal  0.31944  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0029  CDS  NC_011757  31358  32017  660  holo-ACP synthase, malonate decarboxylase-specific  YP_002418926  normal  0.0520843  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0030  CDS  NC_011757  32014  32874  861  triphosphoribosyl-dephospho-CoA synthase MdcB  YP_002418927  normal  0.0747254  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0031  CDS  NC_011757  32871  33794  924  acyl transferase domain-containing protein  YP_002418928  normal  0.413837  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0032    NC_011757  33932  36315  2384      normal  0.011197  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0033  CDS  NC_011757  36407  37297  891  putative general secretion pathway protein K  YP_002418929  normal  0.369925  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0034    NC_011757  37294  37961  668      normal  0.148898  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0035    NC_011757  38023  38292  270      normal  0.0917404  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0036    NC_011757  38298  38713  416      normal  0.113378  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0037  CDS  NC_011757  38737  39381  645  electron transport protein SCO1/SenC  YP_002418930  normal  0.0273218  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0038  CDS  NC_011757  39489  39758  270  hypothetical protein  YP_002418931  decreased coverage  0.00434628  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0039  CDS  NC_011757  39881  42883  3003  Galactose oxidase  YP_002418932  normal  0.261385  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0040  CDS  NC_011757  43010  43741  732  IstB domain protein ATP-binding protein  YP_002418933  normal  0.792091  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0041  CDS  NC_011757  43741  45246  1506  Integrase catalytic region  YP_002418934  normal  0.456904  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0042    NC_011757  45315  45506  192      normal  0.301655  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0043  CDS  NC_011757  45544  47052  1509  phospholipase D/Transphosphatidylase  YP_002418935  normal  0.98088  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0044  CDS  NC_011757  47937  50369  2433  PAS/PAC sensor hybrid histidine kinase  YP_002418936  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0045    NC_011757  50763  50900  138      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0046    NC_011757  50945  51073  129      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0047  CDS  NC_011757  51179  51424  246  hypothetical protein  YP_002418937  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0048  CDS  NC_011757  51543  52610  1068  peptidase M42 family protein  YP_002418938  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0049  CDS  NC_011757  53376  54644  1269  transposase mutator type  YP_002418939  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0050  CDS  NC_011757  55017  55289  273  hypothetical protein  YP_002418940  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0051    NC_011757  55825  56175  351      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0052  CDS  NC_011757  56359  56604  246  hypothetical protein  YP_002418941  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0053  CDS  NC_011757  56766  57083  318  hypothetical protein  YP_002418942  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0054    NC_011757  57144  57377  234      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0055  CDS  NC_011757  57564  57809  246  hypothetical protein  YP_002418943  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0056    NC_011757  57924  58040  117      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0057  CDS  NC_011757  58062  58226  165  hypothetical protein  YP_002418944  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0058    NC_011757  58394  59349  956      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0059  CDS  NC_011757  59438  59674  237  hypothetical protein  YP_002418945  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0060  CDS  NC_011757  59671  60825  1155  transcriptional regulator, Crp/Fnr family  YP_002418946  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0061  CDS  NC_011757  61094  61807  714  cyclic nucleotide-binding protein  YP_002418947  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0062  CDS  NC_011757  61807  62067  261  hypothetical protein  YP_002418948  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0063  CDS  NC_011757  62361  64874  2514  multi-sensor hybrid histidine kinase  YP_002418949  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0064  CDS  NC_011757  65143  65886  744  Methyltransferase type 11  YP_002418950  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0065  CDS  NC_011757  65962  66474  513  hypothetical protein  YP_002418951  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0066  CDS  NC_011757  66523  66729  207  hypothetical protein  YP_002418952  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0067  CDS  NC_011757  67354  67593  240  hypothetical protein  YP_002418953  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0068  CDS  NC_011757  67612  67905  294  hypothetical protein  YP_002418954  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0069  CDS  NC_011757  68105  68266  162  hypothetical protein  YP_002418955  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0070  CDS  NC_011757  69036  69449  414  isochorismatase hydrolase  YP_002418956  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0071    NC_011757  69825  69995  171      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0072  CDS  NC_011757  70657  70860  204  hypothetical protein  YP_002418957  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0073  CDS  NC_011757  70992  71453  462  hypothetical protein  YP_002418958  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0074    NC_011757  72136  72689  554      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0075  CDS  NC_011757  72890  73093  204  hypothetical protein  YP_002418959  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0076  CDS  NC_011757  73189  73758  570  integrase family protein  YP_002418960  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0077  CDS  NC_011757  73800  74081  282  hypothetical protein  YP_002418961  normal  0.932951  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0078  CDS  NC_011757  74139  75338  1200  hypothetical protein  YP_002418962  normal  0.698048  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0079  CDS  NC_011757  75406  75591  186  hypothetical protein  YP_002418963  normal  0.814143  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0080  CDS  NC_011757  75596  76063  468  hypothetical protein  YP_002418964  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0081  CDS  NC_011757  76187  76762  576  hypothetical protein  YP_002418965  normal  0.75599  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0082  CDS  NC_011757  76824  77417  594  transcriptional regulator, MucR family  YP_002418966  normal  0.288227  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0083  CDS  NC_011757  77462  77770  309  hypothetical protein  YP_002418967  normal  0.343905  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0084  CDS  NC_011757  77828  78730  903  restriction endonuclease  YP_002418968  normal  0.243939  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0085  CDS  NC_011757  79024  80214  1191  hypothetical protein  YP_002418969  normal  0.164966  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0086  CDS  NC_011757  80614  81936  1323  integrase family protein  YP_002418970  normal  0.55309  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0087  CDS  NC_011757  82275  83273  999  alpha/beta hydrolase fold protein  YP_002418971  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0088  CDS  NC_011757  83582  83803  222  hypothetical protein  YP_002418972  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0089  CDS  NC_011757  84326  85264  939  homocysteine S-methyltransferase  YP_002418973  normal  0.898737  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0090    NC_011757  85520  85669  150      normal  0.259192  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0091  CDS  NC_011757  85733  86107  375  response regulator receiver protein  YP_002418974  normal  0.589534  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0092    NC_011757  86522  86641  120      normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0093  CDS  NC_011757  86874  87817  944  Transposase and inactivated derivatives-like protein  YP_002418975  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0094  CDS  NC_011757  87837  88613  777  hypothetical protein  YP_002418976  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0095  CDS  NC_011757  88687  89049  363  hypothetical protein  YP_002418977  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0096  CDS  NC_011757  89405  89905  501  hypothetical protein  YP_002418978  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0097  CDS  NC_011757  90422  91237  816  UspA domain protein  YP_002418979  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0098  CDS  NC_011757  91299  91457  159  hypothetical protein  YP_002418980  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0099  CDS  NC_011757  91562  91825  264  hypothetical protein  YP_002418981  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
Mchl_0100  CDS  NC_011757  92145  92657  513  hypothetical protein  YP_002418982  normal  normal  Methylobacterium chloromethanicum CM4  Bacteria 
 
 
-
 
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