| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | plpp0038 |
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| Symbol | |
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| ID | 3117839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Paris |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006365 |
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| Strand | + |
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| Start bp | 34823 |
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| End bp | 36826 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637578543 |
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| Product | hypothetical protein |
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| Protein accession | YP_122193 |
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| Protein GI | 54295881 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | [TIGR02759] type IV conjugative transfer system coupling protein TraD |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.140641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA GTTCTTTGCA AAATATGTGG CAATTTATGA GTGGCGGTCA GATTTTTGAC
TATAAAACCA AAATGATGAT TCAGGTAAGT CAACGTATTT TTCACTGGGC TGTCTTAGGT
TTTGTCGTAC TTTTTTCGCT GATTATGGCA TTTTATGCCT CCTCTGAATT AAAGCTGGTG
GTGCTTAACC ACATTTCAAG GTTCCTGGTT AAATTCCATT ACGGGGAGTA TGTATTATGG
ACCAATCTGA ATGGGAGTAA AATTACAGCG CTTTTTTATC AAAAAAGTCC CCTTATTCAA
GCATCCGTGC AGCAGGCTTT GGATGCTCTT TGGAGAAAAG CGCAAGTTTC TTTATTTTTT
GGTGGAGCGG TGTATTTGTT GATTACGCTG TTGTTTTCCC GTTTCTTTAT TAAGTTAGGT
GAAAAATACA CCAAAGATCA ATTTGTTTCC GGTACGCGCT TAGCGTCTTC GCCTAAAGAA
ACCATCAAAT CGGTCAACGA ATCACAACGT GGCGCTTCAG AAATTAAACT TTTGAATCGC
CTTCCTATGC CTAAGTATTC TGAAAAACAA GGGATGTTGT TTCATGGCAC AACAGGTGCA
GGAAAAACGC AAGCCATGAT GATGCTGTTG GAGCAAATTA GGGCGCTGGG CGAGCCGGCA
ATCATTTATG ATAAAGAATG TACCATCAAA CCTTATTTCT TTGATGAGCG CATTGATGTG
GAGCTCAATC CCATTTCAGA ATTATGTGCC AATTGGAAAA TGTGGCGAGA ATGTGCCAAT
CCGTTGGAGT TTGGCTCCTT TGCCACTTAT TTAATTCCTA AATCAGTTCA AGGCAGCGAT
CCATTTTGGG TTGACTCAGC AAGAACAATT TTCACCTCGA TGGCGTGGAA AATCAGGGAT
TATGCAGAAA AAGATCCAGT GTTTCTTCTG CAGTTATTAC TCACCACCTC ATTGGAGGAA
ATCAGGAACA TTCTCAAAGG TACGGAATCT GAAAATCTGG TGAGTAAGGA AATTGAAAAA
ACGGCCATTT CCATTAAATC CGTGTTGGCA ACCTATACCA AGGCGCTGCG CTTTCTTGAA
GGGCTTGATA AATCGGGTAA AGAAGACTTT TCGATTAAAG AATGGATTGA AAATACAACC
AATCCTAAAA AATACAATAA AGGGTGGTTA TTTATTACCT CACGCTCCAA ATACCATAAA
GAGATAAAGC CTTTAATTTC TCTGTGGTTA GGACTCGCTA TGCAAGGGGT GCAATCCTTG
GTGGCTAATA ATAAGGGGCG TATATGGCTT GTCATGGATG AATTAGCAAG CCTGCATCGT
TTAGAAACCA TTTCAGACAC TCTAGCTGAT ATCCGTAAAT TTGGAGGGTG TGTTGCCATT
GGCATTCAAT CCATTGCGCA ATTAGATTTT ATCTATGGAA CTCATGAGGC CGGAGCCATT
GCGGATCTAC TCAATACATC CATTTATTTT AGGAGCCCAA AATCGAAAGT GGCTAAGTGG
GTTTCCGAGG ATTTAGGCTC ACAAGTGATT AATGAGATGA AAGAAAGTCA GTCTTATGGT
CCTGATTCGG TTCGTGATGG TAATACGGTG GGCTCGCAAC GTACTAAAAG AAATACGGTT
GAAGAGGGCG ATATTATGAC TCTTGATGAT ATGGAGTGTT ATGTCCGTTT GGTAGGAAAT
CATCCCATCA CTCGTTTGAA AAACAAATAC ATTGAGCGTA AAGAAATTTG CGTACCACTT
GTTGAGCGAT CCATCAATTT TGATGCGTTG GAAAAAGTAA ATCACCGCGC GTTAATGGTT
CAAAATAATC CTCAAAGAAA TGACGACGTT AAAAAAATCC ATCAATTTGA AACATTGGCG
CATGAGGTAT CGGATAAGGA TTTAGTACCT CCACAATCAC CTTATGCGGA ACCGGAACCC
AAAGATCACG TTACAGCCAA CAAAAACGAC ACTGATGCTA TTGAGTTGCG TGAGGCCTCC
ATTGTTATAA AAGAAATTTT TTAA
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| Protein sequence | MKQSSLQNMW QFMSGGQIFD YKTKMMIQVS QRIFHWAVLG FVVLFSLIMA FYASSELKLV
VLNHISRFLV KFHYGEYVLW TNLNGSKITA LFYQKSPLIQ ASVQQALDAL WRKAQVSLFF
GGAVYLLITL LFSRFFIKLG EKYTKDQFVS GTRLASSPKE TIKSVNESQR GASEIKLLNR
LPMPKYSEKQ GMLFHGTTGA GKTQAMMMLL EQIRALGEPA IIYDKECTIK PYFFDERIDV
ELNPISELCA NWKMWRECAN PLEFGSFATY LIPKSVQGSD PFWVDSARTI FTSMAWKIRD
YAEKDPVFLL QLLLTTSLEE IRNILKGTES ENLVSKEIEK TAISIKSVLA TYTKALRFLE
GLDKSGKEDF SIKEWIENTT NPKKYNKGWL FITSRSKYHK EIKPLISLWL GLAMQGVQSL
VANNKGRIWL VMDELASLHR LETISDTLAD IRKFGGCVAI GIQSIAQLDF IYGTHEAGAI
ADLLNTSIYF RSPKSKVAKW VSEDLGSQVI NEMKESQSYG PDSVRDGNTV GSQRTKRNTV
EEGDIMTLDD MECYVRLVGN HPITRLKNKY IERKEICVPL VERSINFDAL EKVNHRALMV
QNNPQRNDDV KKIHQFETLA HEVSDKDLVP PQSPYAEPEP KDHVTANKND TDAIELREAS
IVIKEIF
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