Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpp2642 |
Symbol | |
ID | 3118202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Paris |
Kingdom | Bacteria |
Replicon accession | NC_006368 |
Strand | - |
Start bp | 3009015 |
End bp | 3010822 |
Gene Length | 1808 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637581339 |
Product | hypothetical protein |
Protein accession | YP_124947 |
Protein GI | 54298578 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AGGAAAATAT TTAAATGAAA AGGACGTTGA CTGGGGCATT CATGTGGGCA GTATGGTCAT TGTCATCTCA TGCGGCTAGT ATGCAGTTCG AGGTGGATAA ATTAATTAAT CGGCTAAACC CTCGTGTGAA CCTGGGGATA GTAGTGACCG ATCTAACCTC GGGCGAGACG CTATATAAAC GCAATGCCAA TCGTTTGTAT ATTCCTGCCA GCAACATGAA GCTTTTTTCC GAGGCAGCGG CTCTGATGGC CTTGGGTCCA GACTACCAGT TCAAGAATCA ACTCAGTACG AGCGCCAATC AATTACAACA AGGTGTTTTG CACGGAAACT TGTATTTACA TCTCAGCGGC GATCCTTCGT TTAGCAGAGA AGATTTAAAG GCGTTGCTTT CTTCACTCAA GGATTGGAAT ATCACAACCA TTCAAGGTAA TGTGATCATT GACAGTAGTC TGATGTCCAT TCCCGCCTAT CCCCCAGGCT GGCTAACTTC TGATTTATCT TATAGTTATG GTGCGCCAAT AGCACCTTTG ATGGTTGATT CCAACCGATT AACAATCACG GTCAACCCCG GGGCTAAAGC AGGCGCTCCT GCTATTGTTG AAGTAGATGA TGGCGGCGGT ACTATTAACC TGAATAATCA AGCGACCACG AAGGCGAGTG AGAAAGGATG TGGTGTAGGG TTTTATTTGG ATCCTGAGAA CAATTTAACG GTAAGAGGCT GTGTTGGATT AGGGCAATGG GCTGTTCAGC AACGCATCGC TATAAAGAAT CCTTTTGTTT ATGCCCAGGG GATGATTGTG AGTGAGCTTG CCAAGTCTAA TATTAAATTA AATGGACAGG TTTTGCTTGG AAGAGCGCCT GCTGGTACTT TATTAATTGC CACTCGCTAT TCAAAGCCAA TTTCCCAACT GATGGCAGAT ACTTTAAAAC CTTCTGATAA TTTATATGCT GATAGTTTGT ACTTGCATGC TGCTGCCAAA ATTAAGGGTA GTCCTGTAGA TTGGAAGCAA GCACAGCCAG TAATTAAAAA TTTTTTGCAG CAACAAACAG GAATCGATTT AAAAGACTCG AATTTTACAG ATGGTTCTGG ATTATCACGT TATAATTTGG TAACTCCAGC GCAAACCATG GCGCTTTTAA AATTCTTGTA TCAACGTTTC CCATTATCTT ATGAATACAT TGCTGCTTTA CCCATCTCTG GTCGGGATGG TACTTTGCAA AAACGGTTTA AAACCCCAAA TCAACAAGGA TTTGTGCGGG CCAAAACCGG GACGATGACG GGTATGAACA GTTTATCCGG TTACTTGTAT ACTGCTAATG GCCATACTTT GGCTTTTGCT ATGTATATCA ATAGATTACC CGGAAAACCG GCTGGGCCAG GACGTCCATT ATTAGACGCA TTATGCACTT ATTTCTTGCA GCAAAGCCCA ACAAGCAGTC GACTGGCACG GGTATTATCT CCCCACAGTC GCATTAAGTT CCAATTTAAT CCTACACAAA TTGAGTTACA GAGAGTTCAT CAAGCCAAAT GGAGGCGTTT GGAAACGGCA GTGAGGCAGG TCTTGAGAGG ACAGGATGTG AATGTGGTTT ACCGGGGCAA TGAATTAATC GTCACAGACA ATCAGTCTAA TGCGAATAGC GTTTGGAAAG CTTTACAATC AATTGGCAAG AAATATTCAT TCGCCGTAGC CTTGTCTTCT AAAGTGATGC CTGTTACACC ATCGGGAAAA CCTTTGCTTC TTTGGGTGCA AGCACCTTTA TCTGAAAATA AGGCAGAGAG AACCTGGATA ATTCGGGAAG CGGTATAA
|
Protein sequence | MKRTLTGAFM WAVWSLSSHA ASMQFEVDKL INRLNPRVNL GIVVTDLTSG ETLYKRNANR LYIPASNMKL FSEAAALMAL GPDYQFKNQL STSANQLQQG VLHGNLYLHL SGDPSFSRED LKALLSSLKD WNITTIQGNV IIDSSLMSIP AYPPGWLTSD LSYSYGAPIA PLMVDSNRLT ITVNPGAKAG APAIVEVDDG GGTINLNNQA TTKASEKGCG VGFYLDPENN LTVRGCVGLG QWAVQQRIAI KNPFVYAQGM IVSELAKSNI KLNGQVLLGR APAGTLLIAT RYSKPISQLM ADTLKPSDNL YADSLYLHAA AKIKGSPVDW KQAQPVIKNF LQQQTGIDLK DSNFTDGSGL SRYNLVTPAQ TMALLKFLYQ RFPLSYEYIA ALPISGRDGT LQKRFKTPNQ QGFVRAKTGT MTGMNSLSGY LYTANGHTLA FAMYINRLPG KPAGPGRPLL DALCTYFLQQ SPTSSRLARV LSPHSRIKFQ FNPTQIELQR VHQAKWRRLE TAVRQVLRGQ DVNVVYRGNE LIVTDNQSNA NSVWKALQSI GKKYSFAVAL SSKVMPVTPS GKPLLLWVQA PLSENKAERT WIIREAV
|
| |