Gene lpp1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp1981 
SymbolsecF 
ID3116478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand- 
Start bp2243216 
End bp2244133 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content40% 
IMG OID637580678 
Productpreprotein translocase subunit SecF 
Protein accessionYP_124295 
Protein GI54297926 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTT TTAATCCAAA TTCAAAAATA GATTTTATGG GCGCGCGCCG TTGGACTGCA 
TTGTTTTCTA TATTAATTTT TGTAGTGTCT ATTGGCGCAT TGATGATTAA TGGTTTGAAA 
TGGGGATTGG ATTTTACTGG TGGAACGCAA ATTGAAATCA GTTACTCCAA AGCGGCTGAT 
TTACCTTTAA TTAGAGAAAA TCTGAATAAA GCGGGTTTTA AAGAAGCTCA AGTGGTTAGT 
TATGGTACAT CAAAAGATGT ACTTATCAGC ATTGCACCGA GAGCGGATAA ACAGCAGAGC 
ATGCTGGTAG ATCAGGTGAT GGAAGTACTG CCTGGAGCAG TAAAACAACG AGTTGATTTT 
GTTGGTCCGC AAGTTGGACA AGAGTTAGCA ACGAAAGGGG CTCTTGCGAT TATTGTGTCC 
TTGTTAGCCA CGATGATCTA TATCGCTATG CGGTTTGAAT ATAAACTCGC TGTAAGTTCG 
GCAGTGGCTT TGATTCATGA TCCGGTATTG ATTCTGGGCG TTTTTGCTTT GTTCGGAATT 
GAATTTGATC TGAAGGCTCT TGCTGGGTTG TTGGCCGTTA TTGGTTATTC CTTGAATGAT 
ACCATTGTTG TCTTTGATCG TGTCCGAGAA AATTTTGTAA AAATTCGCCG AACAAGTCCA 
ATAGATATTA TGAATATTTC AATCAATCAA ACTCTCTCAA GAACGATCAT GACATCTGTG 
TTGACGCTGT TTGTTGTGGT TGCGCTTTTT GTCTATGGGG GGGAGGCGAT ATATGGGTTT 
TCATTGGCGT TGATTATAGG AATAGTAATA GGTACTTACT CTTCAATTTA TGTTGCTGGC 
GCTTTAGCAG TAGCCATGGG TTTGGATAAC AAGGATTTTC TACCCAGTCA TCGCAGGGAG 
GTGGATGATA GGCCTTGA
 
Protein sequence
MEFFNPNSKI DFMGARRWTA LFSILIFVVS IGALMINGLK WGLDFTGGTQ IEISYSKAAD 
LPLIRENLNK AGFKEAQVVS YGTSKDVLIS IAPRADKQQS MLVDQVMEVL PGAVKQRVDF 
VGPQVGQELA TKGALAIIVS LLATMIYIAM RFEYKLAVSS AVALIHDPVL ILGVFALFGI 
EFDLKALAGL LAVIGYSLND TIVVFDRVRE NFVKIRRTSP IDIMNISINQ TLSRTIMTSV 
LTLFVVVALF VYGGEAIYGF SLALIIGIVI GTYSSIYVAG ALAVAMGLDN KDFLPSHRRE 
VDDRP