Gene lpp1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp1278 
Symbol 
ID3117103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand- 
Start bp1420273 
End bp1421433 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content37% 
IMG OID637579972 
Producthypothetical protein 
Protein accessionYP_123602 
Protein GI54297233 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATGCTCTTCT TATAGTGTTA TTAACCTGGT TTCTTGGAAA CATGGATATA 
CATTTCCTTA CTCCAGCCTT GCCATCATTA GTTGATTACT TCTCGGTAAC TCCCAATACA 
GCCCAACTAA CTATCAGTCT TTTTCTTTTG GGGAAAGCCC TCAGTATGAT TTTATGGGGT 
CTTCTTTCCG AACGTTATGG GAGAAAACCA ATCTTCATTG GAGGACTGTT GTTATTTATT 
CTGAGCAATT TTCTGATTGC TCTAAACCAC TCCATCCTTC TCTTTTTAGT ATGCCGATTT 
CTCCAGGGAA TTAGCGTAGG CGCTACCCTT CTAATGGGTA GAGCAATGAT TAATGATACC 
CATAATGAAC AAAATGCCAC AAAATACTTT GCGTGGTTAT TTACTCTGGC TGGGCTGTTT 
ATTTGCTTTC TTCCATTTTT TGGAGGTTTG ATAAACAGTT ATTGGAATTG GCAAATCGCC 
TCTCTTATCA TTGCTGCCTA TGGCCTGCTT TTATTACCTT TATGTCGAGG TTTAAAGGAA 
ACCAAACCCC ATTATGTAAA ATTCCCTCGG CTAGGTCATA GTATTATGGT GGTCTTCAAC 
CATCCCCTTT TTGTTTCTTA CCTCCTTATT TCTGCCTTGA TGATGGCTGG AGAATCAGCG 
TTTAATACCA GCGCCTCTTT TATTCTTATT AAAGGAGAAA ATTTTACTAG CGCTCAGTAT 
GGTACAATCA AGACCACTAT GGCAATTATG CATTTATTAG GTACCGCTTG TTGTGGCTTA 
ATAGCAAAAT ATTATCATAG TATCCAATTA ACAAAATTAG GAGTACGTTT TTTTATTTTC 
GCAGCATTCT TGATGTGGTT ATTTGTCTTT TCTGCTGAAA ATATATATTT GACTTTTATA 
GTGCCTATGG TGATTTATTA TTTTGGTACA GGTTTCATTG TTGCATCAGC AACAGCATCA 
GCTGTTCGCC CTTTTCCTCA GCAAATGGCC CTTGCATTAG CTATCACTTT ATTTTGTCAA 
TTTAACTGCT CCGCTTTCTT TAGTTTTATT ACCAGCATGA TAGGAATTCA GCAAGTAGAA 
ACTTTTATGT TCTTATTAAG TTTGGTAAGT ATTTTGAGTT TTCTTGCCCT TCTAAAACTT 
CAACGAATGG AGCCCTGCTG A
 
Protein sequence
MKKNALLIVL LTWFLGNMDI HFLTPALPSL VDYFSVTPNT AQLTISLFLL GKALSMILWG 
LLSERYGRKP IFIGGLLLFI LSNFLIALNH SILLFLVCRF LQGISVGATL LMGRAMINDT 
HNEQNATKYF AWLFTLAGLF ICFLPFFGGL INSYWNWQIA SLIIAAYGLL LLPLCRGLKE 
TKPHYVKFPR LGHSIMVVFN HPLFVSYLLI SALMMAGESA FNTSASFILI KGENFTSAQY 
GTIKTTMAIM HLLGTACCGL IAKYYHSIQL TKLGVRFFIF AAFLMWLFVF SAENIYLTFI 
VPMVIYYFGT GFIVASATAS AVRPFPQQMA LALAITLFCQ FNCSAFFSFI TSMIGIQQVE 
TFMFLLSLVS ILSFLALLKL QRMEPC