Gene lpp1247 details

Gene Information

• Locus tag: lpp1247
• Symbol: rpoS
• ID: 3117391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 1384359
• End bp: 1385384
• Gene Length: 1026 bp
• Protein Length: 341 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637579941
• Product: RNA polymerase sigma factor RpoS
• Protein accession: YP_123571
• Protein GI: 54297202
• COG category: [K] Transcription
• COG ID: [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
• TIGRFAM ID: [TIGR02394] RNA polymerase sigma factor RpoS; [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGATG AAGAAGAGCC AATTAAGGAC AAGGAATTTA AAGAAGAGGA ATGGTCTGAG 
CCAGATGATG ACTCTCTGTT GTCAGAAGAG GATATTGAAC CTGATATTGA AAAAATGGAA 
GAAGAGCTTG ATGAACTTCC AGAGTTTACT GATGATGAAG CTTTTCCTTC ATTCCAGCGC 
GGGAAAAATA TTGCCAAGGC TTTAGATGCG ACTCAACTTT ACTTGGGTGA AATTGGTTTT 
TCTCCTTTGC TAACGGCTGA AGAAGAAATC CATTATGCGA CTCTTGCTTT AAAAGGTGAT 
ATGGAAGCAC GCAAGAAAAT GATTGAGTCG AATTTGCGCC TGGTGGTTAA AATAGCCAGA 
CGCTATCTTA ATAGAGGATT ACCTCTTCTG GATCTAATCG AAGAGGGTAA CCTGGGTTTA 
ATGAAGTCTG TTGAGAAATT TGACCCCAAG CGAGGATTCC GTTTTTCAAC TTATGCGACC 
TGGTGGATTA GGCAAACTAT TGAGCGCGCA ATTATGAATC AAACGAGAAC TATCCGCTTG 
CCTATTCATG TCGTGAAAGA ACTTAATGTT TATCTCAGAG CGGCAAGACA ATTGACGCAA 
AAACTGGATC ATGAACCATC ACCTGAAGAA ATAGCAGAAA TGGTGGATAA GCCTTTGGAG 
GATGTCCAAA AATTATTGGG ATTGAATGAT AAAGTCGCTT CAGTTGATAC TCCAATTGGA 
TTTGATGAAA CCAAATCTTT ATTAGATACA ATTGCTGATG AAAACAGTTT AAATCCTGCA 
GAGCTGCTAA CCAATGAGAA TTTAAGGCAG CATATAGAAT CTCTTCTGGA TAAATTAACT 
GAGAATCAAC AGCAGGTTAT CGCAAGACGT TTTGGGTTAA GAGGTTTTGA AAAAGCGACA 
CTGGAAGACG TTGGTAAGGA AATTGATTTG ACCCGAGAAC GCGTTCGCCA AATTCAAGTT 
GAAGCTTTGA AGACACTTAG AACTTTGTTA GAGCGGGTTG GACTAACACA AGAGGATTTG 
TTTTGA 

 

Protein sequence

MQDEEEPIKD KEFKEEEWSE PDDDSLLSEE DIEPDIEKME EELDELPEFT DDEAFPSFQR 
GKNIAKALDA TQLYLGEIGF SPLLTAEEEI HYATLALKGD MEARKKMIES NLRLVVKIAR 
RYLNRGLPLL DLIEEGNLGL MKSVEKFDPK RGFRFSTYAT WWIRQTIERA IMNQTRTIRL 
PIHVVKELNV YLRAARQLTQ KLDHEPSPEE IAEMVDKPLE DVQKLLGLND KVASVDTPIG 
FDETKSLLDT IADENSLNPA ELLTNENLRQ HIESLLDKLT ENQQQVIARR FGLRGFEKAT 
LEDVGKEIDL TRERVRQIQV EALKTLRTLL ERVGLTQEDL F