| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp1060 |
|---|
| Symbol | |
|---|
| ID | 3117423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Paris |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006368 |
|---|
| Strand | - |
|---|
| Start bp | 1183861 |
|---|
| End bp | 1186621 |
|---|
| Gene Length | 2761 bp |
|---|
| Protein Length | 916 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637579755 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_123387 |
|---|
| Protein GI | 54297018 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
|---|
| TIGRFAM ID | [TIGR03744] conjugative transfer ATPase, PFL_4706 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGGAGGCGTG ATGAAACGAT TATCTAACTG GTTGCTTGGG GAAATGAATC CCCAGGCTAT
AAAAGAACTA ACCATTAAAA AGCAATACGC CAATCCTTTG CCCTCGTTTG CTGACAGGCT
GGCCATTGTT GATTTCAACG AACAAGAACA AGTGTTTTTA TTTGCTGATG GAAAAAGTTT
AGGTTCAGGG TTTGAGCTAG GTGATATTCA AGCCGAAGCA GCTTCTCCTG AATACTTGCA
CGCTGTCTTT AATAAAATCC GCGATACCTT TGCAACAGTG GTTCCACTAC ATGCAATAGA
CCCTTGGGTT ATGCAAATGT TTGTTCAAGA CGAATATTGC CTTGATCCGG TTATCGATCA
TATTAAAGCC CAAATTCCAC AACAGTTTAT TGAAAGCTCA TTAACGCAAG ATTACTTACA
ACGCCTGCAA GATCTCTACA ACAAAATGAC CAGGCCAGAA GGTTTATTTC TCGATCCTAA
AACAGGTGCG CCCTATCGAG GACGAAGACG ACGAATCAGA GTATTGTTTT ATAGACAACT
ACATCAAACC ACTTTAACCA GAGAACAAAT TCTTCTCGAA CATCAAGAAG TCATCAGTCA
GATTGAAACC AAACTACGCT CACCGGGTTT AGAAATCAAA CGCCTTAAAG GTCAAGATTA
TTATCAGTGG TGGATACGCT GGTTTAATCC TAAATCAGCC GATGAGATCT TGGAACAATA
TCCCTACCCT AATCACATAC CCGCAGGTTT TAATCTGGCA CAAAATATAT TCTTTTCACC
GCCTGAGAGT GACGAACAAG GATTTATTTT TGAAGGCCGA AAACAAAGAA TCCTGTATGT
TGATGGCTTA AAAGAAGCAC CCATTATTGG TTTAGTCTCC CGAGAAAGAC AACAAGCCAA
TCCTAAGCAC CGATATGCGC TTTTAGATAC TTTGCCAGAA GGAAGCATCT ACACTATTCA
AGTCGTCTTT AGCCATGATG AAAATCTTGA TTCCCATTTA ACACGATTAG AAAAGGGAAT
TGTGGGAACC AGCCTAAAAC CCCAAGAGGT CAGAGATGAT ATAAAAACAG CCCGTAATGA
ATTAAGTATT GGCAATCGTT TATTCTGGGT TAATCAGGCC GTTTTTTATC AAGCAGAGGA
TGAAAAACAA GCACAAGCCA TAGAAAAAAA CCTGCATACC ATTTTCAACG ATGCAAAGAT
GCCCTTAATT CATTCCAGCT ATGATATCCA CCCTTTAAAT TCCTGGCTCA ATGCCTTGCC
GTTTAATTTC GATCCCCGCT ATGCCCGTAA GTACTTATGC TTTGACCGTC TGATGTATGC
CACGGAACTT GCAGCATTGC TTCCAGTTTA TGGCCGAAAC CAAGGGGCAA GGCATCTACC
CTGCTTTCCT TTTTTCAACC GCTTAGGCGA ACCTGTATTC TTTGACTTGT TACATCATGA
TTTTATTAGC CAGAATTCAC ATTGCGCCAT CTTCGCTAAC TCTGGTGGTG GTAAGTCAGT
TTTAACAGGT TGGATGATTC AATCATTACT CGCCATGAAA AACGCCCGTG TAGTACTTTT
TGAAATGGGG AACTCGTTTG ATCGGATGCT CGTTCATGCC AAAGCCCATG GTAAGAAAAC
CAAGCAATTA TTATTAAGCA ATAAAAAAGA AGAAGCTGTT CCATTAAATC CATTTTGTGA
AGCGTATAAA GCAATTCCAG AAATAACAGA TAATTTAAGC GCAGAACAAG CTGCTTTAAT
AGCTCAAAAA ATCATGGATC TTAAAGATCC TGCTCACTCA GAAGATTTAG CTTGTGGTGT
TGGTTCTCGT GCATACCTTG CAGAGCTTGC TTTAGCTTTG CGTACCATGA TTACCGAAGC
CAATTCCATG GAAGAAGAAC AATTTACCCT AGCTGATGAA ACGCTGCTAA TCGAAGTATT
AATTGATGCC ATTCTAACGT CATTTAACGA GGGCATACCA CAAATGCTGA CAGAGCATAT
TGTGAGTGCA TTTCAACGGC GATTAGATAA AGAAACTGTG ACGCGCAAGA AAGATCGGAT
TCTGGATATG CACGACCGAT TAAACAGTTA TGTCATTAAC AGCGCAAAAT CACGCTTTTT
TAATGTACCA ACAGAACCTT TAGGTGATTT TGATATCTTT CATATTGATA TTTCTGCCAT
TAAAGATGAT ACCGGAAAAC TGGCTTTGGT CATGGTGTCT TTGTTGCCAA GAATACTGGC
TATGGCAGAA GCCACTCAAA ACGACAATAG GCCAACCTTT CTTTTTATTG ATGAATCCCA
TCTGCAATTT CAAATTCCTT CTGTGGTGAC AGTGTGTCTA CTGGTAGCCA AAGTAGCTAG
AAAACTCGGG CTTTGGCTGG TTGCAATTAC CCAAAACGTT ACCGACATGA ATTCTGAAAA
GGCTGCAAAG ATTTTATCGC TAATTGAAAC CTGGATTTTG TTGGGACTGG ATGAAAAAGA
AATCACTGAT GTGAAACGCT TTAAATCTTT AACACCGCAG CAAGAAACAT TAATCAGAGA
TATTGATTCG CAAAAAGGTT TGTATGCAGA AGCAGTTTTA TTAGGGTCAC GCTACCAAGG
ATTATTTCGC GTCATTCCAC CTCGCTACCT GCTTGCCCTC TTAATGACTG AGAAATCTGA
AAAAGCACAA CGCCACCTTC TGGAGAAAGA ACATGATGTC CTTGAAGCAG CTGAAATCAT
GGCTAAAAAG CTCGAACAAC CAAAAACAAC TACTAATAAC AGGGCTTATT TTTATGACTA
A
|
|---|
| Protein sequence | MKRLSNWLLG EMNPQAIKEL TIKKQYANPL PSFADRLAIV DFNEQEQVFL FADGKSLGSG
FELGDIQAEA ASPEYLHAVF NKIRDTFATV VPLHAIDPWV MQMFVQDEYC LDPVIDHIKA
QIPQQFIESS LTQDYLQRLQ DLYNKMTRPE GLFLDPKTGA PYRGRRRRIR VLFYRQLHQT
TLTREQILLE HQEVISQIET KLRSPGLEIK RLKGQDYYQW WIRWFNPKSA DEILEQYPYP
NHIPAGFNLA QNIFFSPPES DEQGFIFEGR KQRILYVDGL KEAPIIGLVS RERQQANPKH
RYALLDTLPE GSIYTIQVVF SHDENLDSHL TRLEKGIVGT SLKPQEVRDD IKTARNELSI
GNRLFWVNQA VFYQAEDEKQ AQAIEKNLHT IFNDAKMPLI HSSYDIHPLN SWLNALPFNF
DPRYARKYLC FDRLMYATEL AALLPVYGRN QGARHLPCFP FFNRLGEPVF FDLLHHDFIS
QNSHCAIFAN SGGGKSVLTG WMIQSLLAMK NARVVLFEMG NSFDRMLVHA KAHGKKTKQL
LLSNKKEEAV PLNPFCEAYK AIPEITDNLS AEQAALIAQK IMDLKDPAHS EDLACGVGSR
AYLAELALAL RTMITEANSM EEEQFTLADE TLLIEVLIDA ILTSFNEGIP QMLTEHIVSA
FQRRLDKETV TRKKDRILDM HDRLNSYVIN SAKSRFFNVP TEPLGDFDIF HIDISAIKDD
TGKLALVMVS LLPRILAMAE ATQNDNRPTF LFIDESHLQF QIPSVVTVCL LVAKVARKLG
LWLVAITQNV TDMNSEKAAK ILSLIETWIL LGLDEKEITD VKRFKSLTPQ QETLIRDIDS
QKGLYAEAVL LGSRYQGLFR VIPPRYLLAL LMTEKSEKAQ RHLLEKEHDV LEAAEIMAKK
LEQPKTTTNN RAYFYD
|
|---|
| |