Gene lpp0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0313 
Symbol 
ID3117952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand- 
Start bp355096 
End bp355695 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content40% 
IMG OID637579002 
Productshort chain dehydrogenase 
Protein accessionYP_122653 
Protein GI54296284 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG TGGTGATTGG TGCTACGGGG ATAATTGGAA AAGCAATAGT TGCTGAATTA 
AACCCGAGGC ATGAAATTAT TTCAGCGAGT TATAAAAACA GTGATATTCA AGTGGATATA 
ACCAGTAAAC AATCAATCGA TGCAATGTAC AAAAAATTAA ATACTATTGA TGCGGTTGTG 
TTAGCTACCG GTAAAGTGCA CTTTGCTGCC CTAAAAGACA TGGGAGAAGA CGATTATAAA 
ATTGGTTTGA CCAATAAACT AATGGGTCAA GTTAATGTAG TCTTGGCTGG ATTAGAATAC 
ATCAATGATA ATGGCTCATT TACATTAACA AGCGGAATAT TAAATCGTGA TCCCATTCTC 
TATGGAAGTT CTGCTGCCAT GGTTAATGGC GCATTGGATG GTTTTATCAA AAGCGCTGCT 
CTGGAAATGC CAAGAGGTAT CCGAATCAAT GGTGTAAGCC CAACAGTAAT TACCGAAGCC 
ATGGAAAACT ATGGCCCCTA TTTCAGAGGC TATGAACCTG TATCCGCTGC TCGTGCAGCA 
CTCGCCTACA GCAAGAGTAT TGAGGGCGCT CAAACAGGTC AAGTGTATTG TGTAGGGTAA
 
Protein sequence
MKIVVIGATG IIGKAIVAEL NPRHEIISAS YKNSDIQVDI TSKQSIDAMY KKLNTIDAVV 
LATGKVHFAA LKDMGEDDYK IGLTNKLMGQ VNVVLAGLEY INDNGSFTLT SGILNRDPIL 
YGSSAAMVNG ALDGFIKSAA LEMPRGIRIN GVSPTVITEA MENYGPYFRG YEPVSAARAA 
LAYSKSIEGA QTGQVYCVG