Gene lpl0887 details

Gene Information

• Locus tag: lpl0887
• Symbol: ccmA
• ID: 3116308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: +
• Start bp: 1001077
• End bp: 1001679
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637582664
• Product: cytochrome c biogenesis protein CcmA
• Protein accession: YP_126246
• Protein GI: 54293831
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component
• TIGRFAM ID: [TIGR01189] heme ABC exporter, ATP-binding protein CcmA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGATG TGATTGAACT TGATTTTGAC TATCATGACC AGCCCTTGTT GCAACAAATT 
TCTTTTCATC TTCCTGCTGG AGGCTTATTG CATTTAAAAG GTTCCAATGG AGCAGGAAAA 
ACGACTTTAC TTAAATTAAT CGCAGGTTTG CTTAATCCTG AAAAGGGAGA AATTCTCTTC 
GAAAGGCAAT CTATAAAAAA AGATCTATGC ACCTATCAAA AGCAATTATG TTTTGTGGGG 
CATAGATCAG GGATTAATCC CTATCTTACG ATAAGAGAAA ATTGTTTATA TGACATACAT 
TTTTCTCCTG GTGCAGTGGG CATTACAGAA TTATGCAGAT TATTCAGTTT AGAACACCTT 
ATTGATTATC CCTGTGGATT ACTATCCTCA GGACAAAAAA GGCAAGTTGC TTTATTAAGA 
TTATGGATGT CAAAAGCAAA ATTATGGTTG CTTGATGAAC CTTTGGTTGC TCTTGATGAG 
TTATCATTGC TTACAATTAT CACAAAAATC CAGGAGCACA GGGCAAAAGG TGGTGCTGTA 
TTATTGACCT CTCATCAGGA TTTGCCTTTA AACAAGGCAG ATTATGAGGA GTATCATCTA 
TGA 

 

Protein sequence

MLDVIELDFD YHDQPLLQQI SFHLPAGGLL HLKGSNGAGK TTLLKLIAGL LNPEKGEILF 
ERQSIKKDLC TYQKQLCFVG HRSGINPYLT IRENCLYDIH FSPGAVGITE LCRLFSLEHL 
IDYPCGLLSS GQKRQVALLR LWMSKAKLWL LDEPLVALDE LSLLTIITKI QEHRAKGGAV 
LLTSHQDLPL NKADYEEYHL