Gene lpl0394 details

Gene Information

• Locus tag: lpl0394
• Symbol: rpsD
• ID: 3114713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: +
• Start bp: 443284
• End bp: 443904
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637582170
• Product: 30S ribosomal protein S4
• Protein accession: YP_125760
• Protein GI: 54293345
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAGAT ATCTTGGTCC TAAATGTAAA TTATCACGAC GTGAAGGTTG TGATTTATTA 
CTTAAAAGTG GGGTTCGTGA TCATAAATCC AAGTGTAAAT CTGAAAAGTT ACCTGGACAG 
CATGGTGATA AAAAACCTCG TTTAAATAGT TATGGAATTC AGCTTAGAGA GAAACAAAAG 
ATTAGAAGGC TTTATGGGAT TCTTGAAAAG CAATTCCGTA ATTATTACAA AAAAGCGGCT 
AGACAAAAGG GCTCTACAGG TGAAAATTTA ATGGCTCTAT TGGAAAGACG TTTAGATAAT 
GTTGTTTACC GTATGGGTTT TGCCAGTACA CGTGCTGAAG CTAGACAACT AGTTGCACAT 
AAGGCAATAC TTGTAAATGA TAAAGTAGTT AACGTACCTT CTTTTCTGGT TAATCCTGGG 
GATACTGTAT CAGTTCGACA AAAGGCTAAA AACCAAGGAC GTATCCAAGC TGCTTTAGCT 
TTATCTGAAC AAAGAGCACC CTGTGATTGG ATTACTGTAG ATACTGGTTC TTTTAAAGGT 
ACATTTTCTA CAGCACCAAC GTTAATGGAT TTATCTTCAG ACTACAACGT AAACCTTGTT 
GTAGAACTTT ACTCTAAGTA A 

 

Protein sequence

MARYLGPKCK LSRREGCDLL LKSGVRDHKS KCKSEKLPGQ HGDKKPRLNS YGIQLREKQK 
IRRLYGILEK QFRNYYKKAA RQKGSTGENL MALLERRLDN VVYRMGFAST RAEARQLVAH 
KAILVNDKVV NVPSFLVNPG DTVSVRQKAK NQGRIQAALA LSEQRAPCDW ITVDTGSFKG 
TFSTAPTLMD LSSDYNVNLV VELYSK