Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4167 |
Symbol | phoU |
ID | 5385543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4703243 |
End bp | 4703965 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640867195 |
Product | transcriptional regulator PhoU |
Protein accession | YP_001403109 |
Protein GI | 153950645 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATC TGAATCTAAA TAAACATATT TCCGGCCAGT TCAATGCAGA ACTTGAACAT ATCCGCACCC AAGTTTTAAC TATGGGGGGG TTGGTGGAAC AACAATTATC TGATGCGATC ACCGCCATGC ATAATCAAGA TGGCGAGCTG GCAAAGCGGG TAATTGATGG GGATGAAAAG GTCAATATGA TGGAAGTGGC CATTGATGAA GCCTGTGTGC GCATCATTGC CAAACGTCAG CCAACAGCCA GTGATCTACG GTTAGTCATG GCTATCATTA AGACCATTTC CGAATTAGAG CGTATTGGTG ATGTGGCAGA TAAAATCTGC CGCACAGCAT TGGAAAAATT CTCTCATCAA CATCAACCAC TATTGGTCAG CCTGGAGTCT TTGGGGCGTC ATACGGTGCA AATGCTACAT GATGTCTTGG ATGCATTCGC TCGGATGGAT CTGGATGAAG CTATCCGGAT TTATCGTGAA GACAGAAAGG TCGATCAAGA ATATGAAGGC ATTGTACGTC AATTGATGAC ATATATGATG GAAGATCCGC GAACTATCCC AAGTGTGTTA ACTGCATTGT TTTGTGCTCG TTCCATTGAA CGTATTGGTG ACCGCTGTCA GAATATTTGC GAGTTTATCT TCTACTTTGT TAAAGGGCAT GACTTCCGCC ACCTTGGTGG TGATGACTTA GAGAAGTTAC TCTCTGGTAA GCCTGAAAAA TAA
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Protein sequence | MDNLNLNKHI SGQFNAELEH IRTQVLTMGG LVEQQLSDAI TAMHNQDGEL AKRVIDGDEK VNMMEVAIDE ACVRIIAKRQ PTASDLRLVM AIIKTISELE RIGDVADKIC RTALEKFSHQ HQPLLVSLES LGRHTVQMLH DVLDAFARMD LDEAIRIYRE DRKVDQEYEG IVRQLMTYMM EDPRTIPSVL TALFCARSIE RIGDRCQNIC EFIFYFVKGH DFRHLGGDDL EKLLSGKPEK
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