| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4101 |
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| Symbol | xylF |
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| ID | 5386948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4625542 |
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| End bp | 4626537 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640867131 |
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| Product | D-xylose transporter subunit XylF |
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| Protein accession | YP_001403045 |
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| Protein GI | 153946825 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA AGAACATTTT ACTCTCCGCA TGCGCTGCAC TGGTAATGTT TAGTCAGCCT
GGATTTAGCA AAGAAATTAA AATCGGTATG GCGATTGATG ACTTACGTCT TGAGCGCTGG
CAAAAAGACC GCGATATTTT TGTTAACAAG GCTGAATCCC TCGGTGCTAA AGTTTTTGTT
CAATCGGCCA ATGGCAATGA AGAAACACAA ATGGCGCAGA TTGAAAATAT GATTAACCGT
GGTGTCGATG TCCTGGTTAT TATTCCCTAC AACGGGCAAG TATTAAGTAA TGTGATCGCT
GAAGCAAAAC GGGAAGGCAT AAAAGTGTTG GCTTATGATC GCATGATAAA TAACGCTGAC
ATTGATTTCT ATATCTCCTT TGACAATGAA AAAGTAGGTG AATTACAAGC TAAAAATTTG
GTTGAACGGG TACCTCAGGG CAATTATTTC CTGATGGGCG GTTCACCAGT GGATAATAAT
GCTAAATTAT TCCGTCAGGG GCAGATGACT GTTCTTAATC CATTGATAAA GGACGGTAAA
ATCAAGATTG TAGGTGACCA ATGGGTTGAT GCCTGGCTAC CAGAAAATGC GTTAAAAATC
ATGGAAAATG CCTTAACGGC AAACAATAAC AATATTGATG CTGTGGTGGC CTCTAATGAT
GCAACCGCCG GTGGTGCCAT TCAGGCTTTA GCCGCACAAG GGCTAGCCGG TAAAGTGGCT
ATTTCTGGTC AAGACGCAGA TTTGGCCGCT ATCAAGCGTA TTGTTGCCGG TACGCAAACC
ATGACGGTAT ACAAGCCCAT CAGTAAATTG GCCAATGATG CGGCTGAGAT CGCCGTGACA
TTGGGTAATG GTGAGCAACC GAAAGCAAAC AGCACGTTAA ATAACGGTAT GAAAGATGTT
CCTGCTTATT TGTTAACACC TATTCAGGTC GATAAAAATA ATATTGATAG CACCATCATT
GCTGACGGGT TCCACAAAAA AGCAGATATT TACTAA
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| Protein sequence | MKFKNILLSA CAALVMFSQP GFSKEIKIGM AIDDLRLERW QKDRDIFVNK AESLGAKVFV
QSANGNEETQ MAQIENMINR GVDVLVIIPY NGQVLSNVIA EAKREGIKVL AYDRMINNAD
IDFYISFDNE KVGELQAKNL VERVPQGNYF LMGGSPVDNN AKLFRQGQMT VLNPLIKDGK
IKIVGDQWVD AWLPENALKI MENALTANNN NIDAVVASND ATAGGAIQAL AAQGLAGKVA
ISGQDADLAA IKRIVAGTQT MTVYKPISKL ANDAAEIAVT LGNGEQPKAN STLNNGMKDV
PAYLLTPIQV DKNNIDSTII ADGFHKKADI Y
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