Gene YpsIP31758_4065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4065 
Symbol 
ID5387333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4580007 
End bp4580486 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content47% 
IMG OID640867093 
ProductF5/8 type C domain-containing protein 
Protein accessionYP_001403009 
Protein GI153946827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC AAATTTTAGC GACGTTGCTA CTGGGCGCTC TGTTCTGTGT ACCGGTTTAT 
GCCGCACAGA TTGTTGCCGT CACGGCATCG GGGCATGACA GCGAAAAAGG CCACGTACCA
GCGAATATTG CTGATGGGGA TGTTAAAACA CGTTGGGCGG CTTCGGGTGA TAGTTGGATT
CAACTGGAGC TTGATAAAGC CCAATCGATT GAAAATATTC TGATCGTGCC GTTTAAGGCC
ACCGAGCGTA AGCTGAAATT TGCCATCGCT TACTCTACTG ATGGCAAAAC CTGGCAATCA
TTGGCCGAAG GGTTGGAAAC GATAACTACG GACAAAAAGG GTGAGAAGTT GACCTTTTCG
CCTATCAACG CCAAATATAT CAAATTGGAA ACCTTTGGCA CGGATGTCAA CAAATGGAGT
GCGATTAACG AAGTCGCCAT CAACAGTCTC GCCACGGTGC CTAGTCGCGC CCTTAATTAA
 
Protein sequence
MKKQILATLL LGALFCVPVY AAQIVAVTAS GHDSEKGHVP ANIADGDVKT RWAASGDSWI 
QLELDKAQSI ENILIVPFKA TERKLKFAIA YSTDGKTWQS LAEGLETITT DKKGEKLTFS
PINAKYIKLE TFGTDVNKWS AINEVAINSL ATVPSRALN