Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4027 |
Symbol | |
ID | 5386500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4533815 |
End bp | 4534498 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640867057 |
Product | hypothetical protein |
Protein accession | YP_001402973 |
Protein GI | 153950355 |
COG category | [R] General function prediction only |
COG ID | [COG3822] ABC-type sugar transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCT CCGAGGTCAA CCAAATCCTT AAGCAGACCG GTCATTTCTT TGCCCGACAC CATATCCAGC TACCGCCATT TGCCCGTTTC ACGCCACAAA TATGGCAACA GCTTGACCCT AAAGCCTGGC AAGAACTGTT TGACCTGAAA CTCGGCTGGG ATATTACCGC ATTCGGCGGG AACCATTTTT TTACTCAGGG ATTAACGCTG TTCACCTTAC GCAACGGTTC GGTAAGCGGC ACTCCTTACC CTAAATGCTA CGCCGAAAAA ATCATGCACG TCCGCGAAGG CCAGGTGACA CCTATGCATT TTCACTGGCG TAAACAGGAA GATATCATCA ACCGTGGCGG CGGCAATCTT ATCGTCGAGC TATGGAATTC CGACGCGTTT GAACAAACGG AGAAGAGCGA TGTCACCGTG ACACTCGACG GCTGCCGCCA AACCCATGCG GCAGGCAGCC AGTTACGCTT ATCTCCCGGT GAAAGCATTT GCCTGGTGCC TGGGGTGTAC CACAGTTTCT GGGGCGAGGT AGGTTACGGT GAGGTGCTGG TCGGTGAGGT ATCGATGGTA AATGACGATG ACCACGACAA CCGATTTATG AAACCTCTTG AACGTTTTAA TTCGATTATT GAAGACGAAC CGGCTGAACT TGTGCTGTGT AATGAGTACT GCCGTTTCGT CTGA
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Protein sequence | MKRSEVNQIL KQTGHFFARH HIQLPPFARF TPQIWQQLDP KAWQELFDLK LGWDITAFGG NHFFTQGLTL FTLRNGSVSG TPYPKCYAEK IMHVREGQVT PMHFHWRKQE DIINRGGGNL IVELWNSDAF EQTEKSDVTV TLDGCRQTHA AGSQLRLSPG ESICLVPGVY HSFWGEVGYG EVLVGEVSMV NDDDHDNRFM KPLERFNSII EDEPAELVLC NEYCRFV
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