Gene YpsIP31758_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3976 
SymbolhslR 
ID5386809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4460408 
End bp4460815 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content52% 
IMG OID640867007 
Productheat shock protein 15 
Protein accessionYP_001402924 
Protein GI153949573 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATA AAATCTCCCC AGCGGAATCA GTACGTCTGG ATAAATGGTT ATGGGCCGCA 
CGGTTTTATA AAACCAGAGC GATCGCACGT GACATGGTGG ATGGCGGTAA AGTCCACTAT
AACGGCCAGC GAAGCAAGCC CAGCAAGCTG GTTGAACTCC ATGCTGAAAT CCGTCTGCGG
CAAGGGAATG ATGAGCGCAC GGTGCGTGTC TTGGCGTTAC ATAGTCAACG CCGGGGGGCA
GAGGAAGCCC AAACATTGTA TGAAGAAACC GAGGCGAGCA TTGCCAACCG CGAGAAAGTC
GCACAGGCAC GTAAACTGAA TGCCCTGACG ATGCCGCATC CAGATCGGCG GCCGGATAAA
AAAGAACGTC GCAATCTGAT CAAATTTAAA CAAGGCGAGC CTGAGTAA
 
Protein sequence
MKDKISPAES VRLDKWLWAA RFYKTRAIAR DMVDGGKVHY NGQRSKPSKL VELHAEIRLR 
QGNDERTVRV LALHSQRRGA EEAQTLYEET EASIANREKV AQARKLNALT MPHPDRRPDK
KERRNLIKFK QGEPE