| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3705 |
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| Symbol | |
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| ID | 5386625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4182460 |
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| End bp | 4185306 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866729 |
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| Product | hypothetical protein |
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| Protein accession | YP_001402659 |
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| Protein GI | 153947175 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAT TATTTCGCCC TAAAGCGGCC TCACCCGATA TTCATTTGAA CGATGATGGC
CCTTTTGCTG TTGCGGGACG TGAACCGTGC AGTCGGGAAG GGAAGTTTAC CCATAGCGAT
GAAGCAAAAT CGTATGGCAC CGAACCGTCG ATTATTGATT ATATGCCTTG GGGGGAATAT
CTCCGGGAAG AGCGTTGTTT GTTACTGGAT GATGGCTTGT CGGTCGGCGC AGTTTTTGAA
GTGATCCCGG TCGGAACGGA AGGGCGCTCA ACTGAACGGC TTGAGGAGAT CCGAGACGTT
GTGGAAGATG CATTGCAGGA CAGTTTACCT GAGCTGAATG ACCACCAATG GGTGGTGCAG
TTTTATTGTC AGGATGAGAC GGATGTCACG GCGTACATGG ATAAGCTGCG TAGCTATGTG
AAACCTTGGG CACAGGGCAC GCCGTTTACA CAGGCCTGGC TGGCCGAAAC AGAAAACCAC
ATGAAAAGCA TCTCAGTGGA AAAAGGCCTG TTTGAGGATA AGGTTGTCAC GGGTGCGCCA
TGGCGCGGTC AGACGCGCCG CACGCGGATG GTGATTTACC GCTATGTTGA AAAACGTGGG
CATGAACTGC GGTCACCAGC AGTAATGCTA AATCAAGTTT GTGATCGCCT GACCTCTGCG
TTAGCCGGTG CAGGTATCCG CTGTGAGCGA CAAAATGGGG AGCAAATTCA TAGCTGGTTG
TTGCGCTGGT TTAATCCTAA ACCTGAATGG GTTGCACCGA ATGTACTTTA CCGTACTGCC
CGGTACGATG ACGGCGCGCC GGACTCTTTG CCGATTCTGA ATGATTTCAG CGAAACCCTG
TGGTTTACCC GCCCACGTAG TGACGCTGAA CGCGGCGTAT GGTGGTTTGA TAACATGGCG
CATAAAGCGG TGCCGGTAGA GCGACTGCGC CGTGCTCCTC AGACGGGGCA TCTGACTGGC
GAAGTCAAGC GCGGTGAAAA TATCAATACA TTGATGGATC TGATGCCGGA AGGCACCATG
ATTGCCATGA CGTTAATTGT GCAACCGCAA GATGTGCTGG AAGAGGAGTT TAACCGCCTT
GGCCGCAACG CGATGGGGGA AAATATTGAA TCGACTCGCG TCCGTGAAGA TGAACATAGC
GCCCGTGAAT ATCTGGGCGA ACGGCATAAA TTGTACCGAG CCACGCTGAC GTTCCTGATC
AAAGCATCGG ATCTGGATAT TCTGGACAAA CGTTATCTCG ATATTAGCGC CAAACTGCTT
AATGCCGGGT TACAGCCGGT CAATCCTGAG CACGACGTAG CGCCACTTAA CGGCTATTTG
CGGGCATTGC CCATGTGTTT TAACCCCGAT GCGGATAAAA ATCATTGGTA CACTCGGCTA
ACCTTCGTGC AGCATTTTGC CTGCCTGCTG CCGGTATTTG GGCGGGACAC CGGCACCGGT
CATCCGGGGT TTTCGTTCTT CAATCGTGGC GGTGCGCCGC TAACTTTTGA TCCACTCAAC
AAAGACGACC GCACGCAGAA TGCCCATTTG TTGTTGTTCG GGCCAACCGG CTCAGGAAAA
TCAGCCACGC TGTGCAGTTC GTTGTCTCAA CTGATGGCGG TTCACCGTCC ACGTCTGTTT
CTACTGGAAG CCGGTAACTC TTTTGGCCTG TTTGCCGACT ATTGCAGCTC GTTGGGGCTG
ACGGTCAATA AAATTAGCGT TAAACCCGGT AAAGGGGTTT CATTGGCTCC GTTTGCCGAT
GCACATCTGC TATTGCAGGC CTCTCCCGAT GAATGGGTCA CGGATGAAGC AGAATTATCC
GATATTGATA CAACCGACGA CAACGATGAT AAACGCGATA TTCTCGGTGA AATGGAGATT
GCCGCTCGCC TGATGGTTAC CGGCGGTGAA GCGGCTGAAG AGGCTCGCAT GACGCGGGCT
GATCGGGGGA TGTTGCGCGA AGCCATTCTG GCCGCAGCAC GTACTTCCTT TGAGGCGGGG
CGTCAAATGT TGCCGGAGGA TTTAATGCGT GAGCTGGAAA ATATTGCTCG TGACAACCAT
ACAGATGAAA ACGGACGTGA GCGCAGAACC GCCGGTCGGC GGGCCAGGGC AGAAGAGATG
TCGCAAGCGC TGCGAATGTT TACCGGAGGA TTTGAAGGTG AGCTGTTCAA CCGCCCTGGA
GCGCCCTGGC CAGAAGCCGA TGTCACGCTT ATTGACCTCG GCACCCTTGC TCGCGAAGGC
TACGAAGCAC AGATGGCGGT CGCCGTTATC GCTCTGGTAA ACACTGTCAA TAACATCGCA
GAACGTGATC AGTATCTCGA TCGGGAAATC AATATGGTCA TTGATGAAGC TCATATTGTG
ACCACTAACC CGCTGTTATC GCCTTATATG ACCAAGGTCG TAAAAATGTG GCGCAAGCTC
GGTGCCTGGT TGTGGCTGGC AACACAGAAT TTGGCTGATT ACCCTGATAC CGCAGAAAAA
ATGCTGAACA TGGCGGAGTG GTGGCTGTGT CTGACGATGC CACCAGATGA GGTCGAACAG
ATTTCCCGCT TCAAAAAACT CACCGAGGAG CAAAAAACCA TGTTGTTATC GGCAACAAAA
CTCCCCAGAT GCTACACGGA GGGTGTGGTG TTGGCCAAAC GTGTCGAGGC TTTATTCAGG
GCGGTACCGC CCAGCCTTTA TTTAGCGCTG GGAATGACGG AGAAAGAAGA AAAAGCAGAG
CGCCGTCAGT TAATGACTGA GCATAATTGC AGTGAACTGG AAGCGGCATT CCATGTGGCG
CGAAAGCTGG ATAGGGCGCG GGGTATGACA GCAAAAGAAA AGTCACCCAA AACGGGGGTT
GACTGCTCAA ATCCTTTGGG CAGATAA
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| Protein sequence | MFSLFRPKAA SPDIHLNDDG PFAVAGREPC SREGKFTHSD EAKSYGTEPS IIDYMPWGEY
LREERCLLLD DGLSVGAVFE VIPVGTEGRS TERLEEIRDV VEDALQDSLP ELNDHQWVVQ
FYCQDETDVT AYMDKLRSYV KPWAQGTPFT QAWLAETENH MKSISVEKGL FEDKVVTGAP
WRGQTRRTRM VIYRYVEKRG HELRSPAVML NQVCDRLTSA LAGAGIRCER QNGEQIHSWL
LRWFNPKPEW VAPNVLYRTA RYDDGAPDSL PILNDFSETL WFTRPRSDAE RGVWWFDNMA
HKAVPVERLR RAPQTGHLTG EVKRGENINT LMDLMPEGTM IAMTLIVQPQ DVLEEEFNRL
GRNAMGENIE STRVREDEHS AREYLGERHK LYRATLTFLI KASDLDILDK RYLDISAKLL
NAGLQPVNPE HDVAPLNGYL RALPMCFNPD ADKNHWYTRL TFVQHFACLL PVFGRDTGTG
HPGFSFFNRG GAPLTFDPLN KDDRTQNAHL LLFGPTGSGK SATLCSSLSQ LMAVHRPRLF
LLEAGNSFGL FADYCSSLGL TVNKISVKPG KGVSLAPFAD AHLLLQASPD EWVTDEAELS
DIDTTDDNDD KRDILGEMEI AARLMVTGGE AAEEARMTRA DRGMLREAIL AAARTSFEAG
RQMLPEDLMR ELENIARDNH TDENGRERRT AGRRARAEEM SQALRMFTGG FEGELFNRPG
APWPEADVTL IDLGTLAREG YEAQMAVAVI ALVNTVNNIA ERDQYLDREI NMVIDEAHIV
TTNPLLSPYM TKVVKMWRKL GAWLWLATQN LADYPDTAEK MLNMAEWWLC LTMPPDEVEQ
ISRFKKLTEE QKTMLLSATK LPRCYTEGVV LAKRVEALFR AVPPSLYLAL GMTEKEEKAE
RRQLMTEHNC SELEAAFHVA RKLDRARGMT AKEKSPKTGV DCSNPLGR
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