| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3631 |
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| Symbol | cpdB |
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| ID | 5386686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4097502 |
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| End bp | 4099472 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866651 |
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| Product | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein |
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| Protein accession | YP_001402585 |
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| Protein GI | 153947556 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAAAG CCATGTTCAA GCGTCCGCTG ACGTTATCCC TCCTTGCCAA CCTGATTGCT
GTCGCGACAT CACTGTCTGC TGCCACTGTT GATTTACGAG TATTGGAAAC CACCGACCTA
CACAGCAACA TGATGGATTT TGATTACTAC AAAGATAAAC CCACGGAAAA GTTCGGGCTG
GTACGCACTG CCAGCTTGAT TATCGCAGCC CGGCAACAAG CCACTAACAG CGTGCTGGTG
GATAACGGTG ACGTGATCCA GGGGAGTCCG CTTGGTGATT ATATCGCGGC TAAAGGGTTA
AACGACGGAG AGATTCACCC AGTCTATAAA GCGATGAACA CGCTGGATTA TGCGGTCGGC
AATATCGGTA ACCATGAGTT TAACTATGGG CTGGACTACC TGAAGAAATC ACTGGCAGGG
GCGAAATTCC CATATGTTAA CGCCAACGTG ATTGATGTTA AAACAGGTAA ACCCTTGTTC
CAGCCTTACC TGATCATCGA TACCCCGGTG AAAGATCGTG ACGGAAAGAG CCATAACCTG
CGGATCGGGT ACATTGGTTT TGTACCGCCT CAAGTGATGA TCTGGGATAA GGCGAATCTG
AGTGGCAAAG TCACGGTTAA CGATATCACT GAAACTGCCA AGAAGTGGGT ACCGGAGATG
CGTGAGCAAG GGGCTGATCT GGTTGTTGCT ATCCCGCACT CTGGTCTTTC CAGCGATCCT
TATAAAACCA TGGCTGAAAA TTCGGTTTAT TACCTCAGTC AAGTTCCAGG TATCGATGCC
ATCATGTTCG GCCACGCACA TGGTGTGTTC CCCAGCAAAG ATTTTGCCGC CATCAAAGGC
GCGGATATCA CTCAAGGTAC CTTAAACGGT ATTCCGGCAG TGATGCCTGG CCAATGGGGT
GACCATTTAG GCGTAGTCGA TTTTGTCCTG AATAATGATC AGGGAAAATG GCAAGTTATC
GATGCCAAGG CTGAAGCCCG TCCTATCTAC GATAAAACAG CACAAAAATC ACTGGCGGCA
GAAAATGCCA AACTGGTGGA AGTACTGGCA GTTGATCACC AGAGCACCCG TGATTTTGTC
AGCCAACCGA TTGGTGAAGC ATCAGATAAC ATGTACAGCT ATCTGGCACT GATCCAAGAT
GACCCCACCG TGCAGATTGT GAATAACGCC CAGCGCGCGT ATACCGAACA TTTTATTCAG
GGCGATCCTG ATTTAGCTGA CCTCCCGGTA CTGTCTGCCG CTGCACCGTT TAAAGCCGGT
GGCCGCAAAA ATGATCCCAC CAGTTTTGTT GAGGTGGAAA AAGGGAAGCT GACCTTCCGT
AACGCCGCGG ATTTGTACCT TTATCCAAAT ACGCTCGTCG TCGTGAAAGC CAGTGGGGCG
GAGGTTAAGC AGTGGCTGGA GTGTTCCGCC GCACAGTTTA ATCAAATCGA TATTAACAGC
AGCAAACCGC AATCGTTGAT TAATTGGGAT GGTTTTCGTA CTTATAATTT CGATGTCATC
GATGGTGTAG AGTATGAAAT TGATGTCAGC CAGCCTGCCC GTTACGATGG CGAATGTACG
CTAATCAACG ACCAAGCTGA ACGTATCAAA AACCTGACGT TTAACGGTAA GCCTATCGAT
CCGAAAGCCA CATTCCTGAT TGCCACCAAT AACTACCGCG CTTACAGCGG TAAGTTTGCC
GGTACCGGTG ACAGCCATAT CGCATTCGCT TCACCCGACG AAAATCGAGC GGTCCTGTCT
GCATATATCA GTGCTGAAAC CAAGAAAAAG GGTCAGGTCA TCCCGCGAGC CGACAACAAT
TGGCGTCTGG CAACCCTTGA TAGTAAGCAA CCTTTGGATA TTCGTTTTGA AACCTCTCCA
ACTGCTAAGG CCGCTGATTT TATTAAACAA AAAGCGCAAT ACCCAATGAA AACACAGGGT
ACGGATGAGG TTGGCTTCGC CGTTTATCAA ATCGATTTAC AGAGAAAGTA A
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| Protein sequence | MEKAMFKRPL TLSLLANLIA VATSLSAATV DLRVLETTDL HSNMMDFDYY KDKPTEKFGL
VRTASLIIAA RQQATNSVLV DNGDVIQGSP LGDYIAAKGL NDGEIHPVYK AMNTLDYAVG
NIGNHEFNYG LDYLKKSLAG AKFPYVNANV IDVKTGKPLF QPYLIIDTPV KDRDGKSHNL
RIGYIGFVPP QVMIWDKANL SGKVTVNDIT ETAKKWVPEM REQGADLVVA IPHSGLSSDP
YKTMAENSVY YLSQVPGIDA IMFGHAHGVF PSKDFAAIKG ADITQGTLNG IPAVMPGQWG
DHLGVVDFVL NNDQGKWQVI DAKAEARPIY DKTAQKSLAA ENAKLVEVLA VDHQSTRDFV
SQPIGEASDN MYSYLALIQD DPTVQIVNNA QRAYTEHFIQ GDPDLADLPV LSAAAPFKAG
GRKNDPTSFV EVEKGKLTFR NAADLYLYPN TLVVVKASGA EVKQWLECSA AQFNQIDINS
SKPQSLINWD GFRTYNFDVI DGVEYEIDVS QPARYDGECT LINDQAERIK NLTFNGKPID
PKATFLIATN NYRAYSGKFA GTGDSHIAFA SPDENRAVLS AYISAETKKK GQVIPRADNN
WRLATLDSKQ PLDIRFETSP TAKAADFIKQ KAQYPMKTQG TDEVGFAVYQ IDLQRK
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