| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3412 |
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| Symbol | |
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| ID | 5387784 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3839251 |
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| End bp | 3840954 |
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| Gene Length | 1704 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 640745129 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTAAAC ACATTATTTC CTGCTTATTA CTGATATCAG CCACCTCCGC GCTTGCCGCA
GAAAAACCTA CGCTGACGGT CTATACCTAC GACTCCTTTG CTGCTGACTG GGGCCCAGGC
CCGGCGATTA AGCAGGCCTT TGAAGCTGAA TGCGATTGCC AGCTAAAATT TGTGGCACTG
GAAGATGGCG TTTCACTGCT GAACCGCCTG CGGATGGAAG GTAAAAACAG CCAGGCCGAT
GTGATTTTAG GGTTGGATAA CAATCTGGTA CAGGCGGCAG AAATAAATAT CCTCCGGCAT
AGCCGGAGGT TTTTCATATG CGCCTATAAG GCTCTGTTAC CAGCCGCGCC CTAACAGGCG
CATCGCGATC TGACATTTGC ATCTATGGAT TACTTACGGC CCGTAAACGG GCTACCGGGA
TACGGGATCG AGAGTTGCTC ACCCATTTTA TCCTCTTCCA ATTGGTGCTT TATGTATTCT
TGTATCCTGG CCGTGTTTTT CCCTACCGTA TCAACGTAAT ACCCTCGACA CCAAAACTCC
CTGTTACGGT ATTTGAACTT CAAATCGCCA AACTGCTCAT AAAGCATCAG ACTGCTCTTT
CCCTTCAGGT ACCCCATAAA TCCCGAGACA CTCATCTTGG GCGGGATCTC CAGAAGCATA
TGGATGTGAT CCACACAGCA TTCTGCTTCC AGGATATTCA CGTTTTTCCA TTCGCACAGT
TTTCTTAAAA TACTGCCAAT CGCTCTGCGT TTTTCCCTGT AGAACACCTG CCTTCGGTAC
TTCGGCGCAA AAACTATATG ATATTTACAG TTCCATCGGG TGTGCGCTAA GCTCTTTTCA
TCCCTCATTG GGACCCCCTT TTGATTTCTT GTTGAACATT TGCAGTTGCC AGACCGCAAA
CTGTTTTAAC AAATCAAAAG GGGTTTTTAT AACTGACCCA AAGCTGAAAG CTTTACTGAA
CCCCCAGCCT AGCTGGGGGT TTTCTGGGCA CAACAAACTG GCTTGTTTAC CCCAAGCCAG
GTTGATACCC GTAACCTGAC CCTGCCAGAG CCGTGGCAGA ATAAGACATT TGTCCCTTAC
GATTATGGCT ATTTTGCTTT TGTGTATAAC AAAGAAAAAC TGAAAAAACC GCCAAAAAGC
CTGCACGAAT TAATCAGCAG TAAAGAACCG TGGAAAGTGA TTTATCAAGA CCCACGGACC
AGCACTCCAG GTCTGGGTCT GATGCTGTGG ATGCAAAAAG TTTATGGCGA TCAAGCCCCG
CAAGCATGGC AACAACTGGC GCAGAAAACG GTCACGGTCA CCAAAGGCTG GAGCGAGGCG
TATGGCTTGT TCCTCAAGGG GGAAGCGGAT TTAGTGCTGA GCTACACCAC CTCTCCGGCT
TATCATTTAA TTGCAGAAAA GAATAACAAC TATGCAGCCG CCGATTTCAG TGAAGGCCAC
TATTTACAAG TAGAAGTCGC CGGCCAACTG GCCGCCAGCA AACAACCTGA ACTGGCGCAG
CGCTTTATGC AATTTATCGT GACCCCTGCG TTCCAAAACC ACATTCCAAC CGGCAACTGG
ATGTATCCAG TGATCAAAAT GGATCTACCC GCCGGGTTCG AGACACTGAC CGTGCCACAA
ACAGCGTTGC AATTTGATGC TAAAGACGTG GCGGATAACC GCAGTAAATG GATTCAGGCA
TGGCAATCCG CCGTCAGCCG TTAA
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| Protein sequence | |
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