| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3355 |
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| Symbol | speD |
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| ID | 5385552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3770508 |
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| End bp | 3771302 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640866370 |
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| Product | S-adenosylmethionine decarboxylase |
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| Protein accession | YP_001402312 |
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| Protein GI | 153950461 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
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| TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000000217345 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTCCAAGC TTAAACTGCA CGGCTTCAAC AACCTGACCA AAAGCCTGAG TTTTTGTATT
TACGATATTT GTTATGCCAA GACCGCAGAC GACCGCGATG GCTATATCGC CTACATTGAC
GAACAGTACA ATGCCAATCG CTTGACCGAG ATCTTGAGCG AAACCTGCTC GATCATCGGT
GCCAATATTT TAAATATTGC TCGTCAGGAT TACGATCCAC AAGGTGCCAG CGTCACCATT
TTGGTCAGTG AAGAGCCCGT TGATCCACGC GATGTTGATA CATCTGAACA TCCCGGTCCA
TTGCCAAGCG CCGTGGTGGC CCACCTGGAT AAGAGCCATA TCTGTGTGCA TACTTATCCA
GAAAGCCACC CTGAAGCGGG GTTATGTACT TTCCGTGCCG ATATCGAGGT CTCTACCTGT
GGGGTGATTT CTCCGCTGAA GGCCTTGAAT TACCTGATCC ATCAGCTCGA ATCCGATATC
GTGACCATGG ATTACCGGGT ACGGGGTTTC ACCCGAGATA TCAATGGGGT AAAACATTTT
ATCGATCACA AAATCAATTC CATTCAAAAT TTTATGTCCG ATGACATGAA GTCGCTTTAT
CACATGATGG ATGTGAATGT TTATCAGGAA AATATCTTCC ATACCAAGAT GATGCTGAAA
GATTTCGATT TAAAGCATTA TCTGTTTAAC GCCAAGCCGG AAGAGCTAAG CGCAGAAGAA
AAGGAACAGA TTACCCGCCT GTTATACAAA GAAATGCAGG AAATCTACTA TGGCCGCAAT
GTGCCGGAAG TGTGA
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| Protein sequence | MSKLKLHGFN NLTKSLSFCI YDICYAKTAD DRDGYIAYID EQYNANRLTE ILSETCSIIG
ANILNIARQD YDPQGASVTI LVSEEPVDPR DVDTSEHPGP LPSAVVAHLD KSHICVHTYP
ESHPEAGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTMDYRVRGF TRDINGVKHF
IDHKINSIQN FMSDDMKSLY HMMDVNVYQE NIFHTKMMLK DFDLKHYLFN AKPEELSAEE
KEQITRLLYK EMQEIYYGRN VPEV
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