| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3267 |
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| Symbol | |
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| ID | 5386740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3676706 |
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| End bp | 3677695 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640866282 |
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| Product | carbohydrate ABC transporter permease |
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| Protein accession | YP_001402224 |
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| Protein GI | 153950670 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATT TCGGCAGACT CAAACCGCAA TCCGTCGAAG GGTGGCTGGC TTGGGTCATC
GTTCTTATGT TGGCCCTGTT CTCTCTGCTC AGCCGCGAGT TTCTCTCAAT ACAAAACGTG
CTGGACCTGG CCGAAAGCTA CGCGGTGACC GGTATTTTTG CCCTCGGCCT GTTTGTGGTG
CTGGTCACCG GGGGGATTGA TATCTCCTTT GCAGCCGTGG CCTCCGTGGT GCAATACGTG
GTCGCCTCCT TGTTGCTTAA TGATGTGATT GCCAGCCCGG TGCTCTGTCT GGTCATTGCG
GTAGCTATCG GCGTGTTGCT CGGGTTCGTT AATGCCGTGC TGATTTACTA CCTGAATATT
GTTTCGATCA TTATCACCAT CAGTATGCAG TCCTTGCTGT TCGGTATGCT GATGTGGCTG
ACCAACGGCC ACAGTATTTA TGACTTACCC AACTGGTGGG TCGATCAGCG CTCTATTTTG
CCCTTCACCG TTAACGGCGA GAGTTACCAG ATTGGCTTGC CGCTGGTCAT CATGTTAGCC
ATCGCGCTGT TGACCTGGAT TTTGCTGAAT AAAACGCATA TTGGCCGTCA GCTCTATACC
GTGGGAGGCA GCCCAGAATC CGCTCGCCGT ATCGGGATCC GTGTCTCTCT GATTTATCTG
TTTGCCTATG GCTATTTGGG GGCGGCGGCA GCCATCGGCG GCATGTTACA GACCTACCGC
ATGAGCGAAG TGGTACCTAG CGCGCTGGTC GGTGGTGAGT TGGATGTGCT GGCCGCAGCA
GTATTAGGGG GAGCCAGCTT ATCCGGCGGG CGAGGGTCCG TGATTGGTAC GCTGATGGGG
GTGTTCCTGA TTGGCATCCT GAAAAATGGC CTCAACCTGA TCGGTGTCTC CAGCTACTTC
GTCAACATCG TGATTGGCAT GGTGATCGTC GCCGCCATTT GCGTAACCCA CTACAAAAAA
CGCAAAGAAA CTGATGTTGG CTTTGTCTGA
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| Protein sequence | MANFGRLKPQ SVEGWLAWVI VLMLALFSLL SREFLSIQNV LDLAESYAVT GIFALGLFVV
LVTGGIDISF AAVASVVQYV VASLLLNDVI ASPVLCLVIA VAIGVLLGFV NAVLIYYLNI
VSIIITISMQ SLLFGMLMWL TNGHSIYDLP NWWVDQRSIL PFTVNGESYQ IGLPLVIMLA
IALLTWILLN KTHIGRQLYT VGGSPESARR IGIRVSLIYL FAYGYLGAAA AIGGMLQTYR
MSEVVPSALV GGELDVLAAA VLGGASLSGG RGSVIGTLMG VFLIGILKNG LNLIGVSSYF
VNIVIGMVIV AAICVTHYKK RKETDVGFV
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