| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3156 |
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| Symbol | pepD |
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| ID | 5386787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3554042 |
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| End bp | 3555502 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866163 |
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| Product | aminoacyl-histidine dipeptidase |
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| Protein accession | YP_001402116 |
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| Protein GI | 153948494 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGAAC TGTCTCAACT TTCGCCTCAG CCGTTGTGGG ATATTTTTGC AAAAATTTGT
TCTATCCCAC ATCCCTCTTA CCATGAAGAA GCGCTGGCAC AATATATTGT TACCTGGGCC
AAAGAGAAAG GCCTGCACGC CGAGCGTGAT CAGGTCGGTA ATATCCTGCT GCGTAAACCT
GCCACTAAAG GGATGGAAAA CCGCAAGCCT GTTGCACTGC AAGCGCATTT AGATATGGTG
CCACAGAAAA ATAATGACAC GGTACATGAC TTTACCAAAG ATCCTATCCA GCCTTATATC
GACGGCGAAT GGGTGAAAGC CCGTGGTACC ACATTAGGCG CAGATAATGG TATTGGTATG
GCATCCGCTC TGGCAGTGTT ATCTGATGAT CGCGTTGAGC ATGGGCCACT AGAAGTGTTG
TTAACCATGA CCGAAGAAGC CGGTATGGAT GGTGCCTTCG GCCTGCAACC TAATTGGCTG
AAAGCCGATA TTCTGATCAA TACCGATTCT GAGCAGGAAG GCGAAATCTA CATGGGCTGT
GCCGGTGGTA TTGATTTCAT CACCACCATG CCGCTACAGC GGGAAGCTAT CCCTGTGGGC
TATCAAACAC TAAAATTGAC GATCAAAGGC CTAAAAGGCG GCCACTCAGG TGCGGATATC
CATTTAGGTT TAGGTAACGC CAACAAACTG CTGGCCCGCT TCCTGTTTGA ACAAGCAAAA
GATTTAGATC TGCGGGTGCT GGATCTGAAT GGCGGTACTT TACGTAACGC AATTCCACGG
GAAGGTCACG TAACACTGGC TGTTGCCGCA GACAAAGTGG AACAGCTGAA AAACCTGAGC
CAGAATTACC TGGCAACGTT GAAAGACGAG TTGATCGCGG TCGAAAAAAA TCTGACCCTA
GTACTCGAAC CCGTCTCTAC CGAGACGAAA GCACTGACTA AAGAGACTCA ACAGCGTTTT
GTCGCATTAC TGAATGCCAC GCCAAATGGT GTGATCCGCA TGAGTGATGC GGTTAAAGGT
GTCGTAGAAA CCTCACTTAA CGTGGGTGTT GTTACGATGA ATGAGCATGA AGCAGAAATT
GTCTGCCTGA TTCGTTCCCT GATCGACAGC GGTAAAGATT ACGTAGCCAG TATGCTGACC
GCAATTGGTG AATTAGCGGG TGCCAAAACA TCGCCAAGCG GCGGCTATCC TGGCTGGCAA
CCGGATCCAA CGTCACCGGT CATGGCACTG GTACGGGAAA CCTACCAAAA ACTGTTCAAC
AAAACGCCTA ACATCATGGT TATCCATGCC GGTCTGGAAT GTGGTTTGTT CAAAAAACCC
TATCCTAACA TGGACATGGT GTCGATTGGG CCAACCATGA CCGGCCCGCA TTCACCAGAT
GAACAAGTTC ATATTGAGAG CGTTGGTCAA TATTGGCAGT TATTAACCGC CCTGCTGAAA
GCGATACCTG AACGTACATA A
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| Protein sequence | MSELSQLSPQ PLWDIFAKIC SIPHPSYHEE ALAQYIVTWA KEKGLHAERD QVGNILLRKP
ATKGMENRKP VALQAHLDMV PQKNNDTVHD FTKDPIQPYI DGEWVKARGT TLGADNGIGM
ASALAVLSDD RVEHGPLEVL LTMTEEAGMD GAFGLQPNWL KADILINTDS EQEGEIYMGC
AGGIDFITTM PLQREAIPVG YQTLKLTIKG LKGGHSGADI HLGLGNANKL LARFLFEQAK
DLDLRVLDLN GGTLRNAIPR EGHVTLAVAA DKVEQLKNLS QNYLATLKDE LIAVEKNLTL
VLEPVSTETK ALTKETQQRF VALLNATPNG VIRMSDAVKG VVETSLNVGV VTMNEHEAEI
VCLIRSLIDS GKDYVASMLT AIGELAGAKT SPSGGYPGWQ PDPTSPVMAL VRETYQKLFN
KTPNIMVIHA GLECGLFKKP YPNMDMVSIG PTMTGPHSPD EQVHIESVGQ YWQLLTALLK
AIPERT
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