Gene YpsIP31758_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3102 
SymbolcyoE 
ID5384318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3493842 
End bp3494729 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content47% 
IMG OID640866109 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_001402062 
Protein GI153949222 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGC AATACCTGCA AGTCACTAAG CCAGGAATTA TTTTCGGTAA TTTAATTTCT 
GTCATTGGGG GTTTTCTCCT CGCTTCCAAG GGCGATATTG ATTACCCCCT GTTTCTCTCC
ACCTTATTAG GTGTCTCGTT AGTTGTTGCC TCCGGGTGCG TATTTAACAA CTATATCGAT
CGAGATATCG ATAAAATCAT GGAGAGAACG AAGAATCGTG TCCTGGTCAA AGGGCTTATC
GATCCGAAGG TATCCCTGAT TTATGCATCG GTACTGGGTA TTGCTGGCAT GCTGTTGCTC
TACGTGGCAG CTAATGCATT AGCAATGATG CTGGCTGTTA TTGGTTTCGT TATCTATGTT
GGGGTGTATA GCCTCTACAT GAAACGTAAA TCAGTCTACG GCACCTTGAT TGGCAGCTTG
TCAGGCGCCG CTCCCCCCGT TATTGGTTAC TGTGCCGTAA CGGGGCAATT CGACACTGGC
GCACTGATCT TGTTGCTGAT CTTCAGTCTG TGGCAAATGC CTCATTCCTA TGCCATCGCC
ATCTTCCGCT TTAAGGATTA TCAGGCCGCC AACATTCCGG TACTCCCGGT GATAAAAGGG
ATATCGGTCA CCAAAAACCA TATTACCCTT TATATTTTGG CGTTTATGGT CGCAACCTTG
ATGCTGACAT TAAGTGGCTA TGCCGGTTAT AAATATCTGG TTGTGGCTGC CGCGGTTAGC
GTCTGGTGGC TGGGTATGGC ACTGCGCGGT TATAAGGCAA CGAATGACAG CGTATGGGCG
AGAAAACTCT TTGTCTTCTC TATCATTGCC ATTACGTCAT TGAGCGTCAT GATGTCAGTT
GATTTCAATG TACACTCTTC GGCAGTACTC CTGACTTACG CTGGATAG
 
Protein sequence
MIKQYLQVTK PGIIFGNLIS VIGGFLLASK GDIDYPLFLS TLLGVSLVVA SGCVFNNYID 
RDIDKIMERT KNRVLVKGLI DPKVSLIYAS VLGIAGMLLL YVAANALAMM LAVIGFVIYV
GVYSLYMKRK SVYGTLIGSL SGAAPPVIGY CAVTGQFDTG ALILLLIFSL WQMPHSYAIA
IFRFKDYQAA NIPVLPVIKG ISVTKNHITL YILAFMVATL MLTLSGYAGY KYLVVAAAVS
VWWLGMALRG YKATNDSVWA RKLFVFSIIA ITSLSVMMSV DFNVHSSAVL LTYAG