Gene YpsIP31758_3100 details

Gene Information

• Locus tag: YpsIP31758_3100
• Symbol: cyoC
• ID: 5388182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 3492882
• End bp: 3493496
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640866107
• Product: cytochrome o ubiquinol oxidase subunit III
• Protein accession: YP_001402060
• Protein GI: 153950151
• COG category: [C] Energy production and conversion
• COG ID: [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3
• TIGRFAM ID: [TIGR02842] cytochrome o ubiquinol oxidase, subunit III

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 0.485225
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAACTG AAACTCTGAC TAACCACAAC GTAGCCCATG CAGAGCATGG GCATCACGAT 
GCGGGAGCGA CGAAAGTATT CGGCTTCTGG GTCTACCTGA TGAGCGACTG TATTTTGTTT 
GCGACGCTGT TCGCAACTTA TGCAGTCCTG GTAAATGGGA CCGCTGGCGG TCCTTCAGGC 
AAGGAACTTT TCGATTTGAA CTTTGTTCTG GTCGAAACCT TCCTGCTGCT TTTCAGTAGT 
ATTACTTACG GCGTGGCGAT GCTGGGCATG AGCAAAGGGA GTGTAAAACA GGTCAATACC 
TGGTTGGGCT TCACCTTCCT GTTCGGCCTT GGCTTTATCG CAATGGAACT CTACGAATTC 
CATAAACTGA TTGAAGAAGG TTACGGTCCG GCACGTAGTG GGTTCTTGTC TGCCTACTTT 
GCCTTGGTTG GCACCCATGG TCTTCACGTA ACCGCTGGCC TCGCTTGGAT CATTATTATG 
ATGATTCAAG TAGCAAGACG TGGTCTTAAC TCAACCAATA GAACCCGTCT GATGTGTCTG 
AGTTTGTTCT GGCACTTCCT GGACGTGGTC TGGATCTGTG TATTCACCGT AGTCTATCTG 
TTAGGAGCCA TATAA 

 

Protein sequence

MSTETLTNHN VAHAEHGHHD AGATKVFGFW VYLMSDCILF ATLFATYAVL VNGTAGGPSG 
KELFDLNFVL VETFLLLFSS ITYGVAMLGM SKGSVKQVNT WLGFTFLFGL GFIAMELYEF 
HKLIEEGYGP ARSGFLSAYF ALVGTHGLHV TAGLAWIIIM MIQVARRGLN STNRTRLMCL 
SLFWHFLDVV WICVFTVVYL LGAI