Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2968 |
Symbol | |
ID | 5387758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3337835 |
End bp | 3338755 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640865974 |
Product | AP endonuclease |
Protein accession | YP_001401930 |
Protein GI | 153947785 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGAAAAA CAGAAGCTGA TCGGCATACC ACCGCGGTGC AGTTAGGCAT TAATCCGCTG ACATGGACTA ACGACGATCT GCCTTCTCTG GGGGCGGAAA CATCGCTTGA AACCTGCCTG AGCGAAGGTA AAGAGGCGGG TTTTGCGGGC TTTGAACTGG GCAATAAATT TTCACGCGAG GCGGGGGTTT TAGGGCCAAT TCTAGAGCAT CATCAACTGA AATTGGTCTC CGGGTGGTAT TCCGGGCGGC TGTTGGAACG CTCGGTTGAA GAGGAGATTG TGGCGGTTCG GTCACATCTG GCACTGCTGC GTGAACTGGG GGCTAAGGTG ATGGTATTTG CTGAAGTGTC CGGTTGTATT CATGGTGAAC AGCAAACGCC AGTACATCTG CGCCCAAGGT TTCCGCCAGC GCGTTGGGCG GAGTATGGCG CGAAGCTCAC CGCCTTTGCC CGTTACACGC AGGCACTGGG GGTGCAGATT GCTTACCACC ACCATATGGG CACGGTGATC GAAAGCGCGC AAGATATCGA TAATCTGATG ATTCATACTG GCGAAGAGGT CGGGCTGCTA CTCGACACGG GCCACCTCAC CTTTGCGGGG GCGGATCCGC TGGCGGTGGC ACAACGCTGG ATTGCGCGGA TCAACCATGT CCATTGCAAA GATGTGCGCA CGTCGGTGCT GGCCGATGTC AAAAACCGTA AAACCAGTTT TCTGGACGCG GTGTTGAGTG GCGTATTTAC CGTTCCGGGT GACGGCGGTG TGGACTATCC ACCCATCATG GCGTTACTCA AACAACACGG TTATCAGGGC TGGCTGGTGG TCGAGGCAGA GCAAGATCCT AATGTCGCCC ACCCAATGAC CTATGCGCGC ATGGGCTACC ACAATTTAAG CCGTCTGGCA CATAACGCTG GGCTGATTTA A
|
Protein sequence | MRKTEADRHT TAVQLGINPL TWTNDDLPSL GAETSLETCL SEGKEAGFAG FELGNKFSRE AGVLGPILEH HQLKLVSGWY SGRLLERSVE EEIVAVRSHL ALLRELGAKV MVFAEVSGCI HGEQQTPVHL RPRFPPARWA EYGAKLTAFA RYTQALGVQI AYHHHMGTVI ESAQDIDNLM IHTGEEVGLL LDTGHLTFAG ADPLAVAQRW IARINHVHCK DVRTSVLADV KNRKTSFLDA VLSGVFTVPG DGGVDYPPIM ALLKQHGYQG WLVVEAEQDP NVAHPMTYAR MGYHNLSRLA HNAGLI
|
| |