Gene YpsIP31758_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2840 
Symbol 
ID5386314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3208859 
End bp3209569 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content50% 
IMG OID640865832 
Productputative amino acid ABC transporter, ATP-binding protein 
Protein accessionYP_001401803 
Protein GI153950048 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAGTT TAACCGCTGT AAATCAATAC TATGGAAATA ATCATATTCT CTGGGATATC 
AATCTGGAAC TCCCTCGCGG CCAATGTACG TGCCTGATAG GCCGCAATGG TGTGGGGAAA
ACCACGTTGA TTAATTGCAT TATGGGGCAT TTGCCCATTA AAAGCGGCAC CATGATCTGG
CAGCCCCACC ATGAACCCCC GCAAAATTTG CAACTGCAGC CTGTTGAAAG ACGCAATGCG
TTAGGCATTG GTTATGTCCC ACAAGGTCAG CAAATTTTCT CCCAACTGAG CGTCGAGGAT
AATCTACTGG TCGCCGTGCT GGCAGGCCGC CATAAGTCCC ACCCGATTCC GGGCTGGGTT
TTTGAGCTAT TTCCATTACT GCACGATAAA CGCAGCCAAC GAGGTGGTGA GCTGACCCGT
AATCAACAAC AACAGTTAGC CATTGCCAGA GCCTTGGTCG CAGAGCCAGA ACTGCTTATC
CTTGATGAGC CGGGCAGCGG TACCTCACCG GCGCTGAGTG AAGATATCAG CACGATTCTG
CACCAACTGA GTCGTAATTT GGGTATGACC CTATTATTGG TCGAACACCG CTTGCCATTT
ATTCAGCATA TTGCTGATCG CTTTTGCCTG ATGGCGGGTG GCCGAAATGT CGCTCAGGGG
ACGTTAGATC AATTGAATGA AGGCTTGATT AGCGAGCATT TAGCCCGTTG A
 
Protein sequence
MLSLTAVNQY YGNNHILWDI NLELPRGQCT CLIGRNGVGK TTLINCIMGH LPIKSGTMIW 
QPHHEPPQNL QLQPVERRNA LGIGYVPQGQ QIFSQLSVED NLLVAVLAGR HKSHPIPGWV
FELFPLLHDK RSQRGGELTR NQQQQLAIAR ALVAEPELLI LDEPGSGTSP ALSEDISTIL
HQLSRNLGMT LLLVEHRLPF IQHIADRFCL MAGGRNVAQG TLDQLNEGLI SEHLAR