Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2758 |
Symbol | |
ID | 5388410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3109750 |
End bp | 3110916 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640865747 |
Product | beta-lactam binding protein AmpH |
Protein accession | YP_001401721 |
Protein GI | 153947699 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000277431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA GATTGTTGAA ACGTCTCTCT GCCCCGCTGC TGGCTGCTGC TTTGTGGACT ATTCCGTTGC ACAGCCATGC CGATACTCAG CCGTTGACCT CGCAAGATAC TAAGCTGTTG ACCTCGCAAA TTGTTGACCA ATACGCCGAA CATATCTTCT ATAACAGTGG AGCTGTAGGA ATGGCTCTGG TGGTTATCGA TAACAATCAG GTCGTCAACC GTAGCTTTGG TGAAACGCAA CCCGGCAACA ATATTCGCCC ACGGCCAGAC TCACTGATCC GCATTGCATC AATAACCAAG CTAATGACCA GCGAAATCAT GGTAAAACTG GCTGATGATG GCATCGTTAA GTTAACTGAC CCGTTAAAAA AATATGCACC GAAAGGGGTC AACGTCCCCT CTTACAGTGC TAAGCAACCT ATTAGGCTGT TGCATCTGGC CAGCCATACC AGCGGCCTCC CCCGTGAGCA ACCCGGCGGC CCGCAAAAAA GACCGGTGTT TACCTGGCCG ACCAAAGATA ATCGCTGGCA ATGGTTGAAA CTGGCCAAAG TGACCGTTCC ACCAGGCGTG AAAGCCGCTT ACTCTAATTT AGCTTACGAC TTACTGGCTG ACGCACTGTC ACGAGCTGCG GGGAAACCGT ATGCCCACTT ATTACGTGAT AAAATCACCG CACCACTGGG GATGAAAAAT ACCACCCTGA CCCCGACGGC GGAGCAATGT AAACGCCTGA TGATAGGTGT TGGCAGCAGT CGTTGTGGGA ATACAGTTGC AGCAGCAGGT AGTGGCGGCA TTTACTCGAC CCCCGAAGAT ATGCAGCACT GGATGCAACA ATTCTTAGCT TCTGATAACA GCGCCCCCAA GCGTTCCGCC AAACGTGAGC AAGCGCTTTA CTTCCAGCGC GGTGACTTGG TGTCATTGAA AGGTATGGAT GTCGCCGGTC AAGCTGATGC TCTGGGCTTA GGCTGGGTTT ATATGGCACC TAAAGCTGAC TTACCGGGCA TTATGCAAAA AACCGGCGGT GGCGGTGGAT TTATTACTTA TATGGCGATG GTCCCAGAAA AAAACATTGG CGTTTTTGTG GTGGTCACAC GAAGCCAACT GACTAAATTC AGCAATATGA GTGATGGTGT GAATCAATTG GTTGCTGAGT TGGTGAAAAA TCATTGA
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Protein sequence | MDKRLLKRLS APLLAAALWT IPLHSHADTQ PLTSQDTKLL TSQIVDQYAE HIFYNSGAVG MALVVIDNNQ VVNRSFGETQ PGNNIRPRPD SLIRIASITK LMTSEIMVKL ADDGIVKLTD PLKKYAPKGV NVPSYSAKQP IRLLHLASHT SGLPREQPGG PQKRPVFTWP TKDNRWQWLK LAKVTVPPGV KAAYSNLAYD LLADALSRAA GKPYAHLLRD KITAPLGMKN TTLTPTAEQC KRLMIGVGSS RCGNTVAAAG SGGIYSTPED MQHWMQQFLA SDNSAPKRSA KREQALYFQR GDLVSLKGMD VAGQADALGL GWVYMAPKAD LPGIMQKTGG GGGFITYMAM VPEKNIGVFV VVTRSQLTKF SNMSDGVNQL VAELVKNH
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