Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2735 |
Symbol | |
ID | 5386682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3088838 |
End bp | 3089434 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640865726 |
Product | phage baseplate assembly protein |
Protein accession | YP_001401700 |
Protein GI | 153948231 |
COG category | [S] Function unknown |
COG ID | [COG4384] Mu-like prophage protein gp45 |
TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATG TCAGTGGGCA AATCTCAACT CTATACCGAC AGATAAAAAT GCTGCTGGGG ATCGGGCGGG TGACCGCTTT TGACGACAGC AACGGAGTGC AAACCGTGCA ATATCAAACC CCGTTGGAAG TCCACAGCGA TACGCCAAGG TTAGCTGAAT TTGGTTTCTC GTCGGGATTG CCGGCGGGCA GTGATGTGGT CATTGGTTTC CTGGGGGGTG ATCGTTCCAG CGGGATGATC ATCGCCTCAC ATCATCCGGC CTATCGGCAT ATGGGGCTCA ATGCAGGTGA AACGGTGATT TACGCCCAGT GGGGGCAATT TATCAAACTG ACCGAGAGTG GGGTGGTGAT TGAGGCTAAC AACCAGCCGG TGACCGTCAA TAATGCGACA GAGGTGACCG TAAATGCCAC GGTAAAAGTA CGGTTAAATA CGCCGTTGCT TGAGGTAAGC GGCAATATCA TTGATAACGC TGACAGTAAT AGCGCCACGC TAAAAAGCTT ACGTGACGCC TACAACAGCC ACAATCATCA ACTTAAAAAC GTCCAGTCGG GCAGTACGAC ACTTACCAGT GAAACGCCCG CTAAGGTGGT GCGATGA
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Protein sequence | MSDVSGQIST LYRQIKMLLG IGRVTAFDDS NGVQTVQYQT PLEVHSDTPR LAEFGFSSGL PAGSDVVIGF LGGDRSSGMI IASHHPAYRH MGLNAGETVI YAQWGQFIKL TESGVVIEAN NQPVTVNNAT EVTVNATVKV RLNTPLLEVS GNIIDNADSN SATLKSLRDA YNSHNHQLKN VQSGSTTLTS ETPAKVVR
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