Gene YpsIP31758_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2583 
SymbolserC 
ID5388185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2929520 
End bp2930605 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content47% 
IMG OID640865572 
Productphosphoserine aminotransferase 
Protein accessionYP_001401548 
Protein GI153949172 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00074187 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGG TTTATAATTT TAGCGCTGGT CCAGCAATGT TACCGGTCGA AGTATTACGT 
CGTGCAGAAC AAGAATTACG TAACTGGCAT GGTTTGGGAA CGTCGGTGAT GGAAATTAGT 
CACCGCAGTA AAGAATTTAT GCAGGTTGCT GAAGAGTCGG AGAAAGATCT GCGTGACCTG 
TTGCAGATAC CGGCTAATTA TAAAGTGTTA TTTTGCCATG GTGGTGCCCG AGCACAGTTT 
GCTGCGGTGC CATTGAATTT GCTTGGTGAC AGCAACAGCG CTGACTATAT CGATGGTGGC 
TATTGGGCGC ACAGTGCGGT TAAAGAAGCA CAAAAATACT GCACTCCTCA TGTTATTGAT 
GTCACCACCC ATGACAATGG CTTGACAGGT ATTCAGCCAA TGAAGCAATG GAAGTTGAGC 
GATAATGCTG CCTATGTGCA CTATTGCCCA AATGAAACCA TTGACGGCGT TGCGATTAAT 
GAACAACCTG ATTTCGGCAA TAAAGTTGTC GTTGCCGATT ACTCTTCATC CATTCTTTCC 
CGTCCTATCG ATATTAGCCG TTATGGTGTG ATCTATGCTG GCGCACAGAA GAACATTGGC 
CCAGCGGGCT TGACACTGGT TATCGTGCGT GAAGATTTAC TTGGGAAAGC CCACACGGCG 
TTGCCGTCGA TCCTAGACTA CAAGGTATTG GCAGATAACG ATTCGATGTT CAATACACCG 
CCAACGTTTG CTTGGTATCT TTCTGGCCTG GTATTTAAAT GGCTGAAAGA GCAGGGCGGT 
TTGGGCGAAA TGGAAAAGCG TAATCAGGCG AAAGCTGAAT TATTGTACGG TGCCATCGAC 
CGCACAGGCT TCTATCGCAA TCAGGTTGCT ATTGCTAACC GCTCTTGGAT GAATGTGCCG 
TTCCAAATGG CAGAGGCTTC ATTAGACAAA CTGTTCTTGA GTGAAGCTGA AGCACAAGGT 
CTGCAGGCCT TAAAAGGCCA CCGTGTTGCC GGGGGCATGC GAGCTTCTAT CTATAACGCC 
ATGCCAATTG AAGGCGTAAA AGCCTTAACC GACTTTATGG CTGACTTTGA ACGCCGCCAT 
GGCTGA
 
Protein sequence
MTQVYNFSAG PAMLPVEVLR RAEQELRNWH GLGTSVMEIS HRSKEFMQVA EESEKDLRDL 
LQIPANYKVL FCHGGARAQF AAVPLNLLGD SNSADYIDGG YWAHSAVKEA QKYCTPHVID 
VTTHDNGLTG IQPMKQWKLS DNAAYVHYCP NETIDGVAIN EQPDFGNKVV VADYSSSILS 
RPIDISRYGV IYAGAQKNIG PAGLTLVIVR EDLLGKAHTA LPSILDYKVL ADNDSMFNTP 
PTFAWYLSGL VFKWLKEQGG LGEMEKRNQA KAELLYGAID RTGFYRNQVA IANRSWMNVP 
FQMAEASLDK LFLSEAEAQG LQALKGHRVA GGMRASIYNA MPIEGVKALT DFMADFERRH 
G