| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2362 |
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| Symbol | hpaD |
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| ID | 5386263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2661448 |
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| End bp | 2662305 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640865351 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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| Protein accession | YP_001401331 |
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| Protein GI | 153950678 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAAT TAGCATTAGC AGCAAAAATC ACCCATGTGC CTTCCATGTA TCTGTCTGAG
TTACCGGGAA AGCACCACGG CTGCCGTCAG GCAGCGATCA ATGGTCATCT TGAAATTAGT
CGGCGCTGCC GTGAGCAAGG GGTTGATACT CTTATTGTTT TTGATACCCA TTGGCTGGTG
AACAGTGCGT ATCACATTAA TTGCAGTGAC TCTTTTTCCG GGGTTTATAC CAGTAATGAA
CTGCCACATT TCATTCGCGA TATGGCTTAT GAATATGAGG GCAATCCCGC GCTGGGGCAA
ATGATTGCCG CCGAAGCCTG CAAGTTGGGG GTTCGTGCAC AGGCCCACAA TATTCCGAGT
TTAAAGCTGG AATATGGCAC GCTGGTCCCT ATGCGTTATA TGAATAGCGA TAAGCACTTT
AAAGTGATCT CCATTTCGGC TTTCTGTACC GTTCATGCCT TTGATGACAG CCGTAATCTG
GGTCAGGCCA TCATCAACGC CATTGAACAC TATGATGGCA TCGTTGCAGT TTTAGCCAGC
GGCTCTCTCT CACATCGCTT TATTGATGAT CAACGCGCTG AAGAAGGGAT GAATAGCTAC
ACGCGCGAAT TCGATCATCA GATGGATGAA CGGGTCGTCG AGCTCTGGCG AGAAGGTAAA
TTCAGCGAGT TCTGCCAAAT GTTACCGGAA TATGCCCAGT ACTGTTTTGG CGAGGGCAAT
ATGCACGATA CCGTCATGCT GCTCGGGATG CTGGGATGGG ATAAATACGA TGGCAAGGTG
GAGTTTGTCA CCGATCTGTT TGCCAGTTCG GGTACCGGGC AGGTGAATGC GATATTCCCA
TTGGCCGTTT ACGGGTAA
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| Protein sequence | MGKLALAAKI THVPSMYLSE LPGKHHGCRQ AAINGHLEIS RRCREQGVDT LIVFDTHWLV
NSAYHINCSD SFSGVYTSNE LPHFIRDMAY EYEGNPALGQ MIAAEACKLG VRAQAHNIPS
LKLEYGTLVP MRYMNSDKHF KVISISAFCT VHAFDDSRNL GQAIINAIEH YDGIVAVLAS
GSLSHRFIDD QRAEEGMNSY TREFDHQMDE RVVELWREGK FSEFCQMLPE YAQYCFGEGN
MHDTVMLLGM LGWDKYDGKV EFVTDLFASS GTGQVNAIFP LAVYG
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