| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2334 |
|---|
| Symbol | flhB |
|---|
| ID | 5384347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2636457 |
|---|
| End bp | 2637617 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640865321 |
|---|
| Product | flagellar biosynthesis protein FlhB |
|---|
| Protein accession | YP_001401303 |
|---|
| Protein GI | 153947600 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
|---|
| TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.178036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAAG ATAGCGATCA GGAAAAAAGT GAAGAACCCA CAGCCAGTAA GCTGGAGAAG
GCGCGTGAGA AAGGCCAGAT CCCGCGCTCG CGTGAATTAA CCTCAATGCT GATGCTTGGG
GCCGGTTTGA CTATCCTGTG GATGTCCGGT GAATCAATGG CCCGGCAACT CTCGGCTATG
GTTGCGCAAG GGCTGCATTT TGATCACAGC ATGGTCAGCA ATGACAAACA AATGCTGCGG
CAAATTGGCA TGTTATTACG CCAAACGTTA CTGGCGATGC TGCCGATTTT TGCCGGATTA
GTGATAGTCG CTTTAGCGGT ACCTATGCTC TTGGGTGGAG TGCTGTTCAG TGGCGAGTCA
ATAAAATTTG ACCTAAAACG GATGAGTCCG ATAGCGGGTT TAAAACGCAT GTTTTCCTCA
CAGGCGCTGG CTGAGTTACT GAAAGCCATT TTGAAGGCGA CATTGGTTGG TTGGGTCACC
GGGTTATTCC TTTGGCATAA CTGGCCTGAC ATGATGCGCC TGATTGCCGC GCCACCGGTT
GCTGCATTAG GTGATGCGCT CCACTTGATC ATTTTCTGTG GGCTGGTGGT GGTCTTAGGG
CTGTTGCCAA TGGTCGGGTT TGATGTGTTT TACCAGATAA CCAGCCATAT CAAAAAGTTA
CGTATGACCA AACAAGATAT ACGCGACGAA TTTAAAAATC AGGAAGGCGA CCCACATGTG
AAAGGGCGCA TTCGCCAGCA GCAGCGGGCG ATGGCCCGCC GTCGGATGAT GGTAGATGTG
CCCAAAGCGG ATGTCATCGT AACTAACCCG ACACACTATG CGGTGGCTTT GCAATACAAC
GAATCAAAAA TGAGTGCGCC TAAGGTGTTG GCGAAAGGGG CGGGTGCCGT CGCGCTGCGT
ATCCGTGAGT TAGGTGCTGA ACATCGTATT CCGCTATTAG AAGCGCCGCC ACTGGCGAGG
GCATTATTCC GGCACAGTGA GGTCGGACAA CATATTCCTG CCACCCTTTA TGCCGCAGTC
GCCGAGGTGC TTGCCTGGGT TTATCAGCTG AAACGCTGGA AGCGGGAAGG CGGGCTTATC
CCGAAAAAAC CTGAACATCT GCCGGTGCCG GAAGCACTGG ATTTTGCAAC AGAGAGTGAG
ATAAAGAGTG AGACAGACTA A
|
|---|
| Protein sequence | MAEDSDQEKS EEPTASKLEK AREKGQIPRS RELTSMLMLG AGLTILWMSG ESMARQLSAM
VAQGLHFDHS MVSNDKQMLR QIGMLLRQTL LAMLPIFAGL VIVALAVPML LGGVLFSGES
IKFDLKRMSP IAGLKRMFSS QALAELLKAI LKATLVGWVT GLFLWHNWPD MMRLIAAPPV
AALGDALHLI IFCGLVVVLG LLPMVGFDVF YQITSHIKKL RMTKQDIRDE FKNQEGDPHV
KGRIRQQQRA MARRRMMVDV PKADVIVTNP THYAVALQYN ESKMSAPKVL AKGAGAVALR
IRELGAEHRI PLLEAPPLAR ALFRHSEVGQ HIPATLYAAV AEVLAWVYQL KRWKREGGLI
PKKPEHLPVP EALDFATESE IKSETD
|
|---|
| |