Gene YpsIP31758_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2223 
Symbol 
ID5386839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2536749 
End bp2537624 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content48% 
IMG OID640865206 
Producthypothetical protein 
Protein accessionYP_001401192 
Protein GI153950049 
COG category[S] Function unknown 
COG ID[COG2369] Uncharacterized protein, homolog of phage Mu protein gp30 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.472892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAACAC TTCAGACGCT GATAAAACAG ATCCCACCAC ATCGCAGAGC CCCCATCCGA 
CCAATTAAAC AGACGAATGA AACCGAATAC TATTATCGTG CTCGGTTACG TGACATTGTC
CGGTTAATGG CCCAATCCGT GGATGAAGTA TTAATCCCTG TGTTACGCCG TAATTACACC
GCCGACAGTT ATCTGATCGA TATCATCAAA CAGGCGATCA GGCAGGCATC GGAGAAGTTT
TATACGTCTA CTTTCGGCAG ACAGATTGAC CGATTAGCGC AGCGCGTCGT TAGTCTGGCT
GAGTCTGAAA GTTCAGCGGC ATTTGTCGAG CAAATTAATC GCGCCATCGG TATCGATATG
ACCTCACTCA TGGTTAATGA GTCATTGGTC GATTATTTCG ATGCATCGGT GGAAAACAAT
GTTGCACTGA TCAAATCACT GTCCTCCGAT TATTTCGATG ATATTCAGCG GGAAGTTATG
GACAGCATTA TGCGAGGTGA TTCTCTGACA ACGATGGTCA GGAATATCCA GAAGGTTACC
GGTGCCACCT ATCAGCGATC ACATCTTATT TCCCTCGACC AAACTGCCAA AATTCGTAGT
GATATTACGC ATACACGGCA GGTGAACGCA GGGATAGTCC GTTTTCGCTG GTCTACGTCG
CAAGATGTAC GCGTATCTGG TAACCCTGCG GGTAAATATC CCCGGGCCAG AATCAAATGT
TTTGAAATTG CCCGCGCTGA TGTGGGTTAT GGCGTAGGGG TTTATCTCTG GTTACGGGGT
GCAGCCTACA ACGGAGAAAC AGGGTTATTC CCCGGCAGAG CACATGTAGG GTGCCGCTGT
CACGCGATAC CCCAACTTAA AGATATTGAT TACTAA
 
Protein sequence
MATLQTLIKQ IPPHRRAPIR PIKQTNETEY YYRARLRDIV RLMAQSVDEV LIPVLRRNYT 
ADSYLIDIIK QAIRQASEKF YTSTFGRQID RLAQRVVSLA ESESSAAFVE QINRAIGIDM
TSLMVNESLV DYFDASVENN VALIKSLSSD YFDDIQREVM DSIMRGDSLT TMVRNIQKVT
GATYQRSHLI SLDQTAKIRS DITHTRQVNA GIVRFRWSTS QDVRVSGNPA GKYPRARIKC
FEIARADVGY GVGVYLWLRG AAYNGETGLF PGRAHVGCRC HAIPQLKDID Y