Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2223 |
Symbol | |
ID | 5386839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2536749 |
End bp | 2537624 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640865206 |
Product | hypothetical protein |
Protein accession | YP_001401192 |
Protein GI | 153950049 |
COG category | [S] Function unknown |
COG ID | [COG2369] Uncharacterized protein, homolog of phage Mu protein gp30 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.472892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAACAC TTCAGACGCT GATAAAACAG ATCCCACCAC ATCGCAGAGC CCCCATCCGA CCAATTAAAC AGACGAATGA AACCGAATAC TATTATCGTG CTCGGTTACG TGACATTGTC CGGTTAATGG CCCAATCCGT GGATGAAGTA TTAATCCCTG TGTTACGCCG TAATTACACC GCCGACAGTT ATCTGATCGA TATCATCAAA CAGGCGATCA GGCAGGCATC GGAGAAGTTT TATACGTCTA CTTTCGGCAG ACAGATTGAC CGATTAGCGC AGCGCGTCGT TAGTCTGGCT GAGTCTGAAA GTTCAGCGGC ATTTGTCGAG CAAATTAATC GCGCCATCGG TATCGATATG ACCTCACTCA TGGTTAATGA GTCATTGGTC GATTATTTCG ATGCATCGGT GGAAAACAAT GTTGCACTGA TCAAATCACT GTCCTCCGAT TATTTCGATG ATATTCAGCG GGAAGTTATG GACAGCATTA TGCGAGGTGA TTCTCTGACA ACGATGGTCA GGAATATCCA GAAGGTTACC GGTGCCACCT ATCAGCGATC ACATCTTATT TCCCTCGACC AAACTGCCAA AATTCGTAGT GATATTACGC ATACACGGCA GGTGAACGCA GGGATAGTCC GTTTTCGCTG GTCTACGTCG CAAGATGTAC GCGTATCTGG TAACCCTGCG GGTAAATATC CCCGGGCCAG AATCAAATGT TTTGAAATTG CCCGCGCTGA TGTGGGTTAT GGCGTAGGGG TTTATCTCTG GTTACGGGGT GCAGCCTACA ACGGAGAAAC AGGGTTATTC CCCGGCAGAG CACATGTAGG GTGCCGCTGT CACGCGATAC CCCAACTTAA AGATATTGAT TACTAA
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Protein sequence | MATLQTLIKQ IPPHRRAPIR PIKQTNETEY YYRARLRDIV RLMAQSVDEV LIPVLRRNYT ADSYLIDIIK QAIRQASEKF YTSTFGRQID RLAQRVVSLA ESESSAAFVE QINRAIGIDM TSLMVNESLV DYFDASVENN VALIKSLSSD YFDDIQREVM DSIMRGDSLT TMVRNIQKVT GATYQRSHLI SLDQTAKIRS DITHTRQVNA GIVRFRWSTS QDVRVSGNPA GKYPRARIKC FEIARADVGY GVGVYLWLRG AAYNGETGLF PGRAHVGCRC HAIPQLKDID Y
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