| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2170 |
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| Symbol | |
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| ID | 5388541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2495875 |
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| End bp | 2496702 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640865157 |
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| Product | carbohydrate ABC transporter permease |
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| Protein accession | YP_001401143 |
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| Protein GI | 153947854 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.0148377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATT CTTTGAAGTT TATCTGCCAG AGAACGGGCT TCTATCTCCT GTTGGTGGTG
ATCTTGGTGT TTTTTCTGCT GCCGATTTAC TGGTTGGTGA CGATGTCATT TAAAACCTAT
ATCGACGCGT TTGCCATGCC ACCCAAGCTG TGGTTTACGC CCATCTTGGA TAATTACCGG
CAGGTGCTGG GCAACGGTGA CTTTATTCGT GCATTTGGTA ATAGCCTGCT GATATCGCTG
GTCTCGACAT TTCTGTGTTT GATTCTCGGT GCGTTGTTCG CATACGGCCT GGTGTTCTTC
ATCGAACGGA AAGGGCGGGC GAAGCAGTTC ATTATGAGCC TGCGTTATGC GCCAGTGATC
ATGTTGGTGA TCCCGGTTTA CTACCTAATC ACCAAGCTGG GAATGACGGA CAACTATCTG
GTGCTGATCC TGGTGTATAC CGTGGCAAAC GTGCCTTTCA CCATTCTGAT GATCACCACT
TTTTTTGAAG ATATTCCACC GGAAATCCGG GAGGCTGCCC GCGTTGATGG GGCCAGTGAG
TGGCGCGTGT TCTTAAGCGT AATGTTACCA CTGGCCCGCA CCGGGCTGGC TGCGTCAGGC
GTGCTGACAC TGTTCTTTAT CTGGAACGAA TTCCAGATTG TTCTAACGCT CTCTGGTGAT
TCCACACAAA CGTTGCCAGT GGCGATCACC TCATTCCTGA CCTTTCAGGG GACAGAGTGG
GGCCCACTGA CGGCAGCAGG AACCTTGGTG ATGTTGCCGA TGTTGGTTCT CGGCCTACTG
GTACAAAAAC ATCTGGTGCG CGGTTTAACC ATGGGCGGCG TTAAGTAG
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| Protein sequence | MSDSLKFICQ RTGFYLLLVV ILVFFLLPIY WLVTMSFKTY IDAFAMPPKL WFTPILDNYR
QVLGNGDFIR AFGNSLLISL VSTFLCLILG ALFAYGLVFF IERKGRAKQF IMSLRYAPVI
MLVIPVYYLI TKLGMTDNYL VLILVYTVAN VPFTILMITT FFEDIPPEIR EAARVDGASE
WRVFLSVMLP LARTGLAASG VLTLFFIWNE FQIVLTLSGD STQTLPVAIT SFLTFQGTEW
GPLTAAGTLV MLPMLVLGLL VQKHLVRGLT MGGVK
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