Gene YpsIP31758_2087 details

Gene Information

• Locus tag: YpsIP31758_2087
• ID: 5387609
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 2396839
• End bp: 2397309
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640865073
• Product: cupin domain-containing protein
• Protein accession: YP_001401060
• Protein GI: 153950818
• COG category: [S] Function unknown
• COG ID: [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000000000586329
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTT TCCTGATCAC ACTGGCTGCG CTTTTACTGC CCGGTACGCA AGCGCTTGCT 
GCTGCGCAGG CGGCAGTGAC CGTCAGTCCT GCGGGTTCAC AACCTACGAC TATTGGTGCA 
CCGGAATCTT TTACCGGTAC AGCAAAAGTT GACTCACGGT TTAAAGGCAC CGCCCCAGCC 
CGAATTTCCG GCGGTACCGT CTCATTCGAA GCCGGAGCAC GAACAGCATG GCACACGCAT 
CCCCTTGGAC AGACACTTAT TGTTTCTTCT GGTACCGGCT GGGTACAGGA ATGGGAGGGC 
GCCGCTCAGC AAATCAAAAC CGGTGATGTC GTGTGGATCC CACCGGGTGT TAAACACTGG 
CATGGCGCAT CCGCAAAAGA GTCAATGGTG CATATTGCTG TTTCAGAATC ACTGGACGGT 
AACACTGTGA CGTGGATGGA AAAAGTCACA GACGGCCAGT ACCCACAATA A 

 

Protein sequence

MKVFLITLAA LLLPGTQALA AAQAAVTVSP AGSQPTTIGA PESFTGTAKV DSRFKGTAPA 
RISGGTVSFE AGARTAWHTH PLGQTLIVSS GTGWVQEWEG AAQQIKTGDV VWIPPGVKHW 
HGASAKESMV HIAVSESLDG NTVTWMEKVT DGQYPQ